Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq9 286 3e-72 >seq9 Length=941136 Score = 286 bits (316), Expect = 3e-72 Identities = 963/1484 (65%), Gaps = 34/1484 (2%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| |||| ||||| |||||||| || ||||| || || ||||| || || ||||| Sbjct 165589 GCCTCCCCTACCCTCTTCAACGCCGGTACCCCCAACCCCCAAATGTCATCCTGCTTCCTT 165530 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | |||| |||||| || || || | ||| | ||||||| ||| ||| Sbjct 165529 GTCGCCATGAAGGACGACTCGATTGAGGGGATCTACGAGACCCTCAAGACCTGCGCGCAG 165470 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || || || |||||||| || ||||| |||| || || | ||| || Sbjct 165469 ATCTCCAAGACTGCCGGAGGAATCGGACTCCACATCCACAACGTCCGCGCTAAGGGCTCG 165410 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || || ||||||||| || ||| ||||| |||| || |||||||| | ||| || Sbjct 165409 TATATTGCCGGTACCAACGGTTACTCGAACGGTATCGTTCCCATGCTCCGCGCCTTTGAC 165350 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | ||||||| || || ||||| ||||| | | | |||| | ||||| |||| Sbjct 165349 GCCACGGCGCGATATGTCGACCAAGGTGGAAACAAGCGACCGGGTGCGTTCGCCATCTAC 165290 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 ||||||||||||||||| ||| | | ||| ||||| || | ||||||||||| || Sbjct 165289 CTCGAGCCCTGGCACGCCGACATCTTCGAGTTCCTCGACTTGAGGAAGAACCACGGTAAA 165230 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || || | || | ||||| |||||||| |||||| | | ||||| || ||||| Sbjct 165229 GAAGAGGTCCGTGCTCGGGACCTGTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAG 165170 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || |||||| || | ||||| || | |||||| || || ||||| || || Sbjct 165169 CGTGTCGAGTCGGACGGTGACTGGACCCTCATGTGTCCCGCAGAGTGCCCCGGTCTCGCC 165110 Query 94372 GACGTT--TGTGGATCGCGTTTTGAAGACTTGTATG-CTCGTTACGA-ATCGCAGGGCAA 94427 || ||| ||| | || || | |||| | ||| ||||| | || ||| || Sbjct 165109 GATGTTCACTCGGA--GAAGTTCGAGGCGCTGTACGAGTCG-TACGAGAAGGCTGGG-AA 165054 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || | ||| || | ||| |||||| ||| ||| | || | ||| || Sbjct 165053 GGGGCGAAAGACCATCAAAGCTCAGAAGCTCTGGTTCGCCATCCTCGAGGCTCAGACCGA 164994 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || |||| ||| | | ||||||| ||| |||||||| || |||||||| || Sbjct 164993 GACTGGCGGTCCCTTCATGCTCTACAAGGACGCTGCGAACGCCAAATCGAACCAGCAACA 164934 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 ||||| ||| || ||| || || || ||||||||| ||||||| || | || || Sbjct 164933 TCTCGGTACGATTAAATCCTCCAACCTTTGTACCGAGATTATCGAGTACTCTGCGCCTGA 164874 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667 |||| ||||||| ||||| || | |||| || ||| || ||||||| ||| ||| | Sbjct 164873 CGAGGTTGCTGTCTGTAATCTTGCCTCCCTCGCCCTCCCCGCTTTCGT-CGACATGGAGA 164815 Query 94668 --CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT- 94724 | |||||| |||| || |||| | || | || | | || Sbjct 164814 AGCGGGTCTACGACTTC----------AAGAAGCTCCACGAGATCAC---AAAGGTCGTC 164768 Query 94725 --CTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782 | |||| || || ||| ||| |||| ||| |||||| |||||| ||||| Sbjct 164767 ACCAAGAACTTGGACCAGGTCATCTCTCGAAACTACTATCCCGTCATCGAGGCGCAGAAC 164708 Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842 || ||| || || || ||| |||| |||| ||||||||| |||| || || | || Sbjct 164707 TCCAACATGCGCCACCGCCCCGTCGGTCTCGGTGTCCAGGGTCTCGCCGATGCCTTCATG 164648 Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAA 94902 | || |||||| ||| ||| || ||| | | || | | || ||||| Sbjct 164647 GCTCTCCGCATGCCCTTCGAATCTCCCGCCGCTCGCGAACTCAACATCCAGATCTTCGAG 164588 Query 94903 AGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCA 94962 | || || ||| ||| | | || | | ||||| ||| ||| Sbjct 164587 ACAATCTACCACGCCGCCCTCGAGGCGTCGTGCGAGATGGCC---CAGGAGCTCGGCAAG 164531 Query 94963 CACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGG- 95021 |||| | | | || || ||| || ||||||| | || |||||||||||||| Sbjct 164530 TACGAGACATACGAGGGTTCCCCCATGTCGCAGGGCAAACTCCAATTCGACCTCTGGGGC 164471 Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGG 95081 ||| ||| | | ||| | |||||| | || || || | | | | ||||| Sbjct 164470 CGTG-TCCCCACCGATCTTTGGGACTGGTCCACCCTCCGAGCCCAGATCAAGGAGCACGG 164412 Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141 ||| |||| | || ||||| || |||||||| || |||||||| | ||||| || || Sbjct 164411 TGTACGAAACTCCCTTCTTGTCGCTCCCATGCCTACCGCCTCCACATCCCAGATTCTAGG 164352 Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201 | ||||||| ||||| |||| ||| || | |||| | | || |||||| |||| Sbjct 164351 CTGGAACGAGTGCTTCGAGCCCTACACGTCGATGCTGTATGCCCGCCGAGTGCTCTCCGG 164292 Query 95202 GGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGA-CGTCTCTGGGTGTGTGGG 95260 || |||| ||| || | ||||| ||||| |||| | || ||||| | |||| Sbjct 164291 CGACTTCCAGGTCGTCTGCCCCTGGCTCCTTCGGGATCTGATCAACT-TGGGTCTATGGG 164233 Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320 || || | ||||||| | | ||| ||| ||| |||| ||||| || | Sbjct 164232 ACGATAACATGAAGAACCTCATCATTGCCGCTGGCGGTTCCATCCAAAACATTCCTTCCA 164173 Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364 | || | ||| | ||| | |||||||||| || ||||||||| Sbjct 164172 TCCCCGCCGACCTGAAGTCCATCTACAAGACGGTCTGGGAGATC 164129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722878429920