Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 313 3e-80 >seq2 Length=1757930 Score = 313 bits (346), Expect = 3e-80 Identities = 635/943 (67%), Gaps = 0/943 (0%) Strand=Plus/Minus Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||||||| ||||| | || | || || |||||| ||| | || ||| Sbjct 716587 GTGGAGAAGATTTCGGACTTCTTGGTGGGGACAGTGGTGTTTCTCTTAATGAGGGGAGTC 716528 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || ||||| || || |||| || | |||| || | || || | ||| | ||| Sbjct 716527 ATGATACCGCCGGCGGTCTCGATACCCATCGACAAGGGAGCGACATCGAGGAGCAGGAGG 716468 Query 6989 TCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTAT 7048 || || || ||| ||||| || | ||| ||||| ||||| | || ||||| Sbjct 716467 TCCTGGGTAGCCTCGGAGGTGTCACCGGTAAGGATAGCGGCCTGGACAGCGGCACCGTAG 716408 Query 7049 GCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGAT 7108 ||||| |||||||||||||| || | | || | || || || || || Sbjct 716407 GCGACGGCCTCATCGGGGTTGATGGACCTGTTGGGCTCACGGCCAGAGAAGGTGTCGGAA 716348 Query 7109 AACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACT 7168 | | | || ||||| ||||| || || || |||||||| | ||||| || | || Sbjct 716347 ACAAGCTTCTGGATTTTGGGGATACGGGTGGAACCACCGACGAGGACGATCTCGTGGACG 716288 Query 7169 TTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGG 7228 | || |||||||| ||||| || || || || || || ||||| ||| Sbjct 716287 GAGGCCTTGTCGATCTTGGAGTCGCGGAGGACCTTCTCCACGGGGTCCATGGTGGATCGG 716228 Query 7229 AACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACG 7288 || | |||| || || ||||| || || |||||||| ||||| || ||||| ||||| Sbjct 716227 AAGAGGTCCTGGCAGAGCTCCTCGAATCGGGCACGGGTGATGGAAGTGTAGAAGTCAACA 716168 Query 7289 CCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTT 7348 |||||| | | || || || || |||| || || || | || || | |||||||| Sbjct 716167 CCGTCGAAGAGGGAGTCGATCTCGATGGAGGTCTGGGCGGCGGAGGAAAGGGTTCGCTTG 716108 Query 7349 GCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTC 7408 || ||||| || || ||||| | |||||| ||||| || | ||| ||| | || ||| Sbjct 716107 GCTCGCTCGCAAGCAGTTCGGAGACGACGGAGGGCTCGGGCGTTGGAGGACAAGTCCTTC 716048 Query 7409 TTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCA 7468 || | ||||| || ||||| | |||||| | | || ||||| || ||| Sbjct 716047 TTGTTCTTACGCTTGAACTCCTGGACGAAGTGGTTGACCAATCGGTTGTCGAAGTCCTCA 715988 Query 7469 CCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT 7528 ||||||||||| || || || ||||| || ||||| || |||||||| | || ||| | Sbjct 715987 CCACCCAAGTGAGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCCTCCTCGATGGTG 715928 Query 7529 AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCG 7588 | || || ||||| || || ||||| || || || || ||||| |||||| | ||| | Sbjct 715927 AGCAGGGAGACATCGAAGGTTCCACCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCC 715868 Query 7589 TCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGA 7648 ||| ||||| ||||||||||| ||||| || || || || || || || || || || Sbjct 715867 TCTGACTTCTTGTCGAGACCGTAGGCGATGGCAGCGGCGGTGGGCTCGTTGATGATTCGG 715808 Query 7649 AGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTA 7708 || || || || || || | || || || || || || || || || ||||| Sbjct 715807 AGGACGTCAAGACCGGCGATGAGACCAGCGTCCTTGGTGGCCTGACGCTGGGAGTCGTTG 715748 Query 7709 AAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCG 7768 |||||||| ||||| || || || || | ||||| | |||||| || | || ||| Sbjct 715747 AAGTAGGCGGGGACGGTGACAACGGCCTTGGTGACGGTTCCACCGAGGTAGGCCTCAGCG 715688 Query 7769 ATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || ||||| ||| | | ||||| ||||||||||| |||| Sbjct 715687 GTCTCCTTCATCTTGATCAAGACCATGGATGAAATCTCCTCAG 715645 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/188 (72%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 ||||||| || || | ||||| || || ||||| ||||| | |||||||||||| Sbjct 715484 AACTTTCGGCCAATCAATCGCTTGGCGTCGAAAACGGTGTTGTAGGGGTTCATGGCGACC 715425 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 |||||||| || || || || || ||||| || | || | || || || || || Sbjct 715424 TGGTTCTTGGCGGCATCACCAATGAGACGCTC---AGAGTCGTTGAAGGCAACATAGGAG 715368 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || || ||||| || || |||||||| || || || || || |||||| |||||| || Sbjct 715367 GGTGTGGTTCGGTTACCCTGGTCGTTGGCGATGATCTCGACACGGTCGGATTGCCACACA 715308 Query 8108 CCGACGCA 8115 ||||| || Sbjct 715307 CCGACACA 715300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132387163680