Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01]
52 sequences; 19,344,119 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq9 176 5e-39
seq1 105 8e-18
>seq9
Length=941136
Score = 176 bits (194), Expect = 5e-39
Identities = 1071/1702 (63%), Gaps = 35/1702 (2%)
Strand=Plus/Plus
Query 109515 CTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTC 109574
||| || || ||| | |||| ||||| |||| ||| |||| ||| || || || ||
Sbjct 164075 CTGGTCAATAAATGCAGCACGGTCAGCAGCCAAGTCAATGACTGCCTTCTGACTGATCTC 164134
Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634
|||||| |||||||| | ||| | || |||| ||| |||||||| || ||
Sbjct 164135 CCAGACCGTCTTGTAGATGGACTTCAGGTCGGCGGGGATGGAAGGAATGTTTTGGATGGA 164194
Query 109635 GCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACC-AGAGACCGACCTTTTTGA 109693
|| ||||| | ||||| | |||||| | | ||| || | ||||| | || | |
Sbjct 164195 ACCGCCAGCGGCAATGATGAGGTTCTTCATGT-TATCGTCCCATAGACCCAAGTTGATCA 164253
Query 109694 GATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGT 109753
|||| || || | ||| || || || || | || || ||| |
Sbjct 164254 GATCCCGAAGGAGCCAGGGGCAGACGACCTGGAAGTCGCCGGAGAGCACTCGGCGGGCAT 164313
Query 109754 AGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAG 109813
| | | | ||||||||| ||||| ||||| || |||||| || || | ||||| |
Sbjct 164314 ACAGCATCGACGTGTAGGGCTCGAAGCACTCGTTCCAGCCTAGAATCTGGGATGTGGAGG 164373
Query 109814 CTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCAC 109873
| || ||||||||||| | ||||| |||||| | ||| | | ||| | | | | |
Sbjct 164374 CGGTAGGCATGGGAGCGACAAGAAGGGAGTTTCGTACACCGTGCTCCTTGATCTGGGCTC 164433
Query 109874 GCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTT 109933
| | | | ||| || || || | | | ||| |||| | || ||
Sbjct 164434 GGAGGGTGGACCAGTCCCAAAGATCGGTG------GGGACACGGCCCCAGAGGTCGAATT 164487
Query 109934 GAAGTACACCCTCAGCAGCA--GGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTC 109991
| ||| |||| || || || ||||||| | | |||||||| || |||
Sbjct 164488 GGAGTTTGCCCT--GCGACATGGGGGAACCCTCGTATGTCTCGTACTTGCCGAGCTCCTG 164545
Query 109992 GGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATT 110051
||||| |||| | || ||||| || || || || || || ||||| || || || ||
Sbjct 164546 GGCCATCTCGCACGACGCCTCGAGGGCGGCGTGGTAGATTGTCTCGAAGATCTGGATGTT 164605
Query 110052 CATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAG 110111
| ||||| | | | |||||||| | | | || || |||| || ||
Sbjct 164606 GAGTTCGCGAGCGGCGGGAGATTCGAAGGGCATGCGGAGAGCCATGAAGGCATCGGCGAG 164665
Query 110112 ACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTAC 110171
|||||| ||||||||||| | |||||| || |||||| ||| | || ||
Sbjct 164666 ACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTGGAGTTCTGCGCCTCGATGAC 164725
Query 110172 GGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231
||| || |||| || ||||||| | | | ||||| || || ||| ||||| ||
Sbjct 164726 GGGATAGTAGTTTCGAGAGATGACCTGGTCCAAGTTCTTGGTGACGACCTTTGTGATCTC 164785
Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAAT 110291
||||| || | | | ||| | | ||||| | | ||| | |||||| || |
Sbjct 164786 GTGGAGCTTCTTGAAGTCGTAGACCCGCTTCTCCATGTCGACGAAAGCGGGGAGGGCGAG 164845
Query 110292 AGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACA 110351
|| |||||||| || |||| | |||||| | | ||| || | ||| || |||||
Sbjct 164846 GGAGGCAAGATTACAGACAGCAACCTCGTCAGGCGCAGAGTACTCGATAATCTCGGTACA 164905
Query 110352 CAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT-GCATGCAT 110410
| |||||| ||||| ||| | | | ||| |||||||||| ||| ||| || |
Sbjct 164906 AAGGTTGGAGGATTTAATCGTACCGAGATGTTGCTGGTTCGATTTGGCGTTCGCA-GCGT 164964
Query 110411 CCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA 110470
|||| ||||||||| | || ||||| || ||||| | || ||| ||||| ||| |
Sbjct 164965 CCTTGTAGAGCATGAAGGGACCGCCAGTCTCGGTCTGAGCCTCGAGGATGGCGAACCAGA 165024
Query 110471 -CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTT-----CCTCCTCGTACTTGGTGT 110524
| || | || || || | || || |||| ||| ||||||| ||
Sbjct 165025 GCTTCTG-AGCTTTGATGGT--CTTTCGC---CCCTTCCCAGCCTTCTCGTACGACTCGT 165078
Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGA 110584
||| |||| || | || || ||||| | ||||| || ||||||| |
Sbjct 165079 ACAGCGCCTCGAACTTCTCCGAGTGAACATCGGCGAGACCGGGGCACTCTGCGGGACACA 165138
Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644
||||| ||| | || || ||| || | ||||||||| ||||| | ||||| | |
Sbjct 165139 TGAGGGTCCAGTCACCGTCCGACTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGG 165198
Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704
| |||| ||||| || ||| ||||||| | ||| ||||| | | || | |
Sbjct 165199 CGTAGAACAGGTCCCGAGCACGGACCTCTTCTTTACCGTGGTTCTTCCTCAAGTCGAGGA 165258
Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---AC 110761
| || | ||| || | |||||| || ||||| |||| |||| | ||| ||
Sbjct 165259 ACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAACGCACCCGGTCGCTTGT 165318
Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821
|| | |||| ||||| || || ||||| | ||| | | |||||| |||| || |
Sbjct 165319 TTCCACCTTGGTCGACATATCGCGCCGTGGCGTCAAAGGCGCGGAGCATGGGAACGATAC 165378
Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881
| | || | ||| || ||||| ||| || || || || | || |||||| |
Sbjct 165379 CGTTCGAGTAACCGTTGGTACCGGCAATATACGAGCCCTTAGCGCGGACGTTGTGGATGT 165438
Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAA 110940
| | || || || || || ||| || || || || ||| |||| || | ||
Sbjct 165439 GGAGTCCGATTCCTCCGGCAGTCTTGGAGATCTGCGCGCAGGTCT-TGAGGGTCTCGTAG 165497
Query 110941 ATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGA 111000
|| || |||||||| || |||| |||| | || ||||| || ||||| || ||
Sbjct 165498 ATCCCCTCAATCGAGTCGTCCTTCATGGCGACAAGGAAGCAGGATGACATTTGGGGGTTG 165557
Query 111001 GGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTG 111060
|| || || || |||||||| ||||| | || || |||| | | |||||
Sbjct 165558 GGGGTACCGGCGTTGAAGAGGGTAGGGGAGGCGTGGGTGAAGTATCGCTCAGACATGAGA 165617
Query 111061 TTGTATGTGTCGAGTGCGGAGGGTACATCTT--TACCGTGAATACCAATGGCAACTCGCA 111118
||||| || || | || || || || |||||| ||||| | |||||| ||||
Sbjct 165618 TTGTAAGTCTC-AATG-ACCTTGTCAATGTTGGCACCGTGGATACCGACGGCAACACGCA 165675
Query 111119 TGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCT 111178
||| ||| | || || ||||| | || || | || || | ||||| ||
Sbjct 165676 TGATCATGTGCTGGGGACGTTCGACGATTTTACCGTTGACGCGAAGGAGGTAGGATCGCT 165735
Query 111179 CTAGGGTCTTGAGACCAAAGTA 111200
| ||||| |||| |||||||||
Sbjct 165736 CGAGGGTTTTGAAACCAAAGTA 165757
>seq1
Length=4122216
Score = 105 bits (116), Expect = 8e-18
Identities = 172/246 (70%), Gaps = 9/246 (4%)
Strand=Plus/Minus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || || || || ||||| || ||||||||||| || |||| || ||
Sbjct 3090413 GGCAAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 3090354
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
||||||||||| | ||||| ||||| ||||||| || || || ||||||||
Sbjct 3090353 GGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 3090294
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCG----- 119669
||||| || ||| || |||| || ||||| || ||||| ||||| |||
Sbjct 3090293 ACCCTCGACGGCGGCAAAGGCGATGAGGCGCTCGGC-GAAGGT--GGACTTCTCGTCTGT 3090237
Query 119670 -AACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTC 119728
| |||||| || ||||||| |||||| || |||||||||| || | |||||| ||
Sbjct 3090236 AATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCGTC 3090177
Query 119729 GAAAAG 119734
|| ||
Sbjct 3090176 AAAGAG 3090171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975617165600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |