Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq9 176 5e-39 seq1 105 8e-18 >seq9 Length=941136 Score = 176 bits (194), Expect = 5e-39 Identities = 1071/1702 (63%), Gaps = 35/1702 (2%) Strand=Plus/Plus Query 109515 CTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTC 109574 ||| || || ||| | |||| ||||| |||| ||| |||| ||| || || || || Sbjct 164075 CTGGTCAATAAATGCAGCACGGTCAGCAGCCAAGTCAATGACTGCCTTCTGACTGATCTC 164134 Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634 |||||| |||||||| | ||| | || |||| ||| |||||||| || || Sbjct 164135 CCAGACCGTCTTGTAGATGGACTTCAGGTCGGCGGGGATGGAAGGAATGTTTTGGATGGA 164194 Query 109635 GCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACC-AGAGACCGACCTTTTTGA 109693 || ||||| | ||||| | |||||| | | ||| || | ||||| | || | | Sbjct 164195 ACCGCCAGCGGCAATGATGAGGTTCTTCATGT-TATCGTCCCATAGACCCAAGTTGATCA 164253 Query 109694 GATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGT 109753 |||| || || | ||| || || || || | || || ||| | Sbjct 164254 GATCCCGAAGGAGCCAGGGGCAGACGACCTGGAAGTCGCCGGAGAGCACTCGGCGGGCAT 164313 Query 109754 AGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAG 109813 | | | | ||||||||| ||||| ||||| || |||||| || || | ||||| | Sbjct 164314 ACAGCATCGACGTGTAGGGCTCGAAGCACTCGTTCCAGCCTAGAATCTGGGATGTGGAGG 164373 Query 109814 CTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCAC 109873 | || ||||||||||| | ||||| |||||| | ||| | | ||| | | | | | Sbjct 164374 CGGTAGGCATGGGAGCGACAAGAAGGGAGTTTCGTACACCGTGCTCCTTGATCTGGGCTC 164433 Query 109874 GCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTT 109933 | | | | ||| || || || | | | ||| |||| | || || Sbjct 164434 GGAGGGTGGACCAGTCCCAAAGATCGGTG------GGGACACGGCCCCAGAGGTCGAATT 164487 Query 109934 GAAGTACACCCTCAGCAGCA--GGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTC 109991 | ||| |||| || || || ||||||| | | |||||||| || ||| Sbjct 164488 GGAGTTTGCCCT--GCGACATGGGGGAACCCTCGTATGTCTCGTACTTGCCGAGCTCCTG 164545 Query 109992 GGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATT 110051 ||||| |||| | || ||||| || || || || || || ||||| || || || || Sbjct 164546 GGCCATCTCGCACGACGCCTCGAGGGCGGCGTGGTAGATTGTCTCGAAGATCTGGATGTT 164605 Query 110052 CATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAG 110111 | ||||| | | | |||||||| | | | || || |||| || || Sbjct 164606 GAGTTCGCGAGCGGCGGGAGATTCGAAGGGCATGCGGAGAGCCATGAAGGCATCGGCGAG 164665 Query 110112 ACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTAC 110171 |||||| ||||||||||| | |||||| || |||||| ||| | || || Sbjct 164666 ACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTGGAGTTCTGCGCCTCGATGAC 164725 Query 110172 GGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTC 110231 ||| || |||| || ||||||| | | | ||||| || || ||| ||||| || Sbjct 164726 GGGATAGTAGTTTCGAGAGATGACCTGGTCCAAGTTCTTGGTGACGACCTTTGTGATCTC 164785 Query 110232 ATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAAT 110291 ||||| || | | | ||| | | ||||| | | ||| | |||||| || | Sbjct 164786 GTGGAGCTTCTTGAAGTCGTAGACCCGCTTCTCCATGTCGACGAAAGCGGGGAGGGCGAG 164845 Query 110292 AGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACA 110351 || |||||||| || |||| | |||||| | | ||| || | ||| || ||||| Sbjct 164846 GGAGGCAAGATTACAGACAGCAACCTCGTCAGGCGCAGAGTACTCGATAATCTCGGTACA 164905 Query 110352 CAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT-GCATGCAT 110410 | |||||| ||||| ||| | | | ||| |||||||||| ||| ||| || | Sbjct 164906 AAGGTTGGAGGATTTAATCGTACCGAGATGTTGCTGGTTCGATTTGGCGTTCGCA-GCGT 164964 Query 110411 CCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA 110470 |||| ||||||||| | || ||||| || ||||| | || ||| ||||| ||| | Sbjct 164965 CCTTGTAGAGCATGAAGGGACCGCCAGTCTCGGTCTGAGCCTCGAGGATGGCGAACCAGA 165024 Query 110471 -CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTT-----CCTCCTCGTACTTGGTGT 110524 | || | || || || | || || |||| ||| ||||||| || Sbjct 165025 GCTTCTG-AGCTTTGATGGT--CTTTCGC---CCCTTCCCAGCCTTCTCGTACGACTCGT 165078 Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGA 110584 ||| |||| || | || || ||||| | ||||| || ||||||| | Sbjct 165079 ACAGCGCCTCGAACTTCTCCGAGTGAACATCGGCGAGACCGGGGCACTCTGCGGGACACA 165138 Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644 ||||| ||| | || || ||| || | ||||||||| ||||| | ||||| | | Sbjct 165139 TGAGGGTCCAGTCACCGTCCGACTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGG 165198 Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704 | |||| ||||| || ||| ||||||| | ||| ||||| | | || | | Sbjct 165199 CGTAGAACAGGTCCCGAGCACGGACCTCTTCTTTACCGTGGTTCTTCCTCAAGTCGAGGA 165258 Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---AC 110761 | || | ||| || | |||||| || ||||| |||| |||| | ||| || Sbjct 165259 ACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAACGCACCCGGTCGCTTGT 165318 Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821 || | |||| ||||| || || ||||| | ||| | | |||||| |||| || | Sbjct 165319 TTCCACCTTGGTCGACATATCGCGCCGTGGCGTCAAAGGCGCGGAGCATGGGAACGATAC 165378 Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 | | || | ||| || ||||| ||| || || || || | || |||||| | Sbjct 165379 CGTTCGAGTAACCGTTGGTACCGGCAATATACGAGCCCTTAGCGCGGACGTTGTGGATGT 165438 Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAA 110940 | | || || || || || ||| || || || || ||| |||| || | || Sbjct 165439 GGAGTCCGATTCCTCCGGCAGTCTTGGAGATCTGCGCGCAGGTCT-TGAGGGTCTCGTAG 165497 Query 110941 ATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGA 111000 || || |||||||| || |||| |||| | || ||||| || ||||| || || Sbjct 165498 ATCCCCTCAATCGAGTCGTCCTTCATGGCGACAAGGAAGCAGGATGACATTTGGGGGTTG 165557 Query 111001 GGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTG 111060 || || || || |||||||| ||||| | || || |||| | | ||||| Sbjct 165558 GGGGTACCGGCGTTGAAGAGGGTAGGGGAGGCGTGGGTGAAGTATCGCTCAGACATGAGA 165617 Query 111061 TTGTATGTGTCGAGTGCGGAGGGTACATCTT--TACCGTGAATACCAATGGCAACTCGCA 111118 ||||| || || | || || || || |||||| ||||| | |||||| |||| Sbjct 165618 TTGTAAGTCTC-AATG-ACCTTGTCAATGTTGGCACCGTGGATACCGACGGCAACACGCA 165675 Query 111119 TGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCT 111178 ||| ||| | || || ||||| | || || | || || | ||||| || Sbjct 165676 TGATCATGTGCTGGGGACGTTCGACGATTTTACCGTTGACGCGAAGGAGGTAGGATCGCT 165735 Query 111179 CTAGGGTCTTGAGACCAAAGTA 111200 | ||||| |||| ||||||||| Sbjct 165736 CGAGGGTTTTGAAACCAAAGTA 165757 >seq1 Length=4122216 Score = 105 bits (116), Expect = 8e-18 Identities = 172/246 (70%), Gaps = 9/246 (4%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || ||||| || ||||||||||| || |||| || || Sbjct 3090413 GGCAAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 3090354 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||||||||| | ||||| ||||| ||||||| || || || |||||||| Sbjct 3090353 GGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 3090294 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCG----- 119669 ||||| || ||| || |||| || ||||| || ||||| ||||| ||| Sbjct 3090293 ACCCTCGACGGCGGCAAAGGCGATGAGGCGCTCGGC-GAAGGT--GGACTTCTCGTCTGT 3090237 Query 119670 -AACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTC 119728 | |||||| || ||||||| |||||| || |||||||||| || | |||||| || Sbjct 3090236 AATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCGTC 3090177 Query 119729 GAAAAG 119734 || || Sbjct 3090176 AAAGAG 3090171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975617165600