Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=4122216 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 29776 CTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCG 29835 || ||||||||||| |||||| | ||| || |||||||||||| |||||| || || Sbjct 2379917 CTTGGCTCCCTCTCCAGCTGAACCATCAAGGGCTCCACGTGATCCTTGTAGACATGTGCA 2379976 Query 29836 TCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGC--CCGGTGACGTGAGCCATCATGT 29893 || |||| | | | |||||| | | || || || || | || || ||||| | Sbjct 2379977 TCGCCCATTTGGAGTATAAACTC--CTTGGCCTCGCATCCCGTCAAATGCGCAATCATAT 2380034 Query 29894 ACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACC 29953 ||||||||||| ||| ||||||||| ||||| || ||||| || | || | || | Sbjct 2380035 GCGTGAGGAGAGCGTAAGAGGCGATGTTGAAGGGGACGCCGAGGCCGAGATCGCAAGAGC 2380094 Query 29954 TCTGGTAGAGCTGACACGAGAGCT 29977 ||| || | | | |||||||||| Sbjct 2380095 GCTGATACATCAGGCACGAGAGCT 2380118 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/174 (72%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 30041 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30100 ||||||||||||| |||| | || || | || ||| |||||||| | || | Sbjct 2380248 CTTTGGGGTTCCAAGCGCTAAGGACAATCCTCCGGTCGGTCGGGTTGTTTTTAATAGTAT 2380307 Query 30101 CCACGGC-GTTTTGCAGCTGATCCACCCCCATCCCCGAGTA-GTCTGCCCTCATGTCCGT 30158 |||| | | ||| |||||||||||||| | ||| || | | | | ||||||| Sbjct 2380308 CCACAACAGCCTTG-AGCTGATCCACCCCTTTACCCTCATAAGAGTCCTCGCATGTCCC- 2380365 Query 30159 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCC 30212 ||||| || || ||||||| ||| |||||||| ||||||||||||| |||||| Sbjct 2380366 GTACTTCGCACCAAAATGCCGCCATTGGAACCCATACACCGGTCCCAAGTCTCC 2380419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617341038596