Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 >seq1 Length=4122216 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 101289 TATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCT 101348 || |||| |||| | ||| | | |||| |||||||||||||| || || ||||| |||| Sbjct 3074328 TACTGTAGTCGGAAAGAGTGCGGCCATCCTCCAATTGCTTACCAGCGAAAATCAATCGCT 3074387 Query 101349 GTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGT 101408 | || || || || || || || || || ||||| || || ||| | || | |||| Sbjct 3074388 GCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATTGTCAATGGTGT 3074447 Query 101409 CAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCA 101468 | |||| || ||||| || |||| || |||||||| | |||||| || || ||||||| Sbjct 3074448 CGGACGACTCAACTTCGAGGGTGATTGTCTTGCCGGTAAGAGTTTTGACGAAGATCTGCA 3074507 Query 101469 T 101469 | Sbjct 3074508 T 3074508 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || || || | ||| | ||||| ||||| || || || || ||||| |||| Sbjct 3074005 CCTCCCCTCAATCGCAGAACGAGGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAA 3074064 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||| | || || | || || || || || ||||| ||||| || || || ||| Sbjct 3074065 AGCGTTCGCCCGTCTTCGAGCTGTTTGCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGA 3074124 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || ||||| || || || || ||| || | || | ||||| | || ||| Sbjct 3074125 ATACCCTCTTTGTCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCGCTGGACTCGACT 3074184 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| ||||||||||| | || || || || |||||||| Sbjct 3074185 TCGAGGGTGATGGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 3074231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278148858564