Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq9 232 1e-55 seq1 183 6e-41 >seq9 Length=941136 Score = 232 bits (256), Expect = 1e-55 Identities = 931/1446 (64%), Gaps = 59/1446 (4%) Strand=Plus/Plus Query 212704 ACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGG 212763 ||| ||||||||| || |||| || | |||||| |||| ||| |||| | |||| Sbjct 164068 ACTTACTCTGGTCAATAAATGCAGCACGGTCAGCAGCCAAGTCAATGACTGCCTTCTGAC 164127 Query 212764 AGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCT 212823 || |||||| || |||||| |||| || ||||| | |||| | || ||||| | Sbjct 164128 TGATCTCCCAGACCGTCTTGTAGATGGACTTCAGGTCGGCGGGGATGGAAGGAATGTTTT 164187 Query 212824 GCACAGACCC-CCTGTGT--ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCC 212880 | | || || || | | ||| | || | | ||||| |||| ||| || ||| Sbjct 164188 GGATGGAACCGCCAGCGGCAATGATGAGGTTCTT---CATGTTATCGTCCCATAGACCCA 164244 Query 212881 TGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCC 212940 | | ||| | | || ||| ||| | ||||||||| || |||||||| Sbjct 164245 AGTTGATCAGATCCCGAAGGAGCCAGGGGCAGACGACCTGGAAGTCGCCGGAGAGCAC-- 164302 Query 212941 TCCTCTGGTAAA-AGTTT-GAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTG 212998 || | || | | || | || ||||||||||||| || |||||| || |||||||| Sbjct 164303 TCGGCGGGCATACAGCATCGACGTGTAGGGCTCGAAGCACTCGTTCCAGCCTAGAATCTG 164362 Query 212999 TGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCC 213058 | ||| ||| || ||||||||||| || || || ||| | || |||||||| Sbjct 164363 GGATGTGGAGGCGGTAGGCATGGGAGCGACAAGAAGGGAGTTTCGTACACCGTGCTCCTT 164422 Query 213059 GATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTC----CTCGTCCTTCA 213114 ||| || || || | ||||||||| ||| ||| | || || Sbjct 164423 GATCTGGGCTCGGAGGGTGGACCAGTCCCAA-----AGATCGGTGGGGACACGGCC---- 164473 Query 213115 CGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGT 213174 ||| | ||| || || | |||| | || |||| |||| ||| | || Sbjct 164474 ----CCAGAGGTCGAATTGGAGTTTGCCCTGCGACATGGGGGAACCCTCGTATGTCTCGT 164529 Query 213175 AGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTT 213234 | ||| |||||| ||||| |||||| ||||||| ||||| |||| |||||| || | Sbjct 164530 ACTTGCCGAGCTCCTGGGCCATCTCGCACGACGCCTCGAGGGCGGCGTGGTAGATTGTCT 164589 Query 213235 CAAATATCTCCCTGTTGAGCTTCTTG-GCCTCTGGGGACGTGAAGGGCATCATCAT-GCG 213292 | || |||| ||||||| ||| | || | || || ||||||||| | || Sbjct 164590 CGAAGATCTGGATGTTGAG-TTCGCGAGCGGCGGGAGATTCGAAGGGCATGCGGAGAGCC 164648 Query 213293 TTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA 213352 || || |||| || || |||||||| |||| |||| ||| | ||| | || ||| || Sbjct 164649 ATG-AAGGCATCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTGGA 164707 Query 213353 CTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGG 213411 || | || ||| | ||| || |||| | ||||| || || | ||| || Sbjct 164708 GTTCTGCGC-CTCGATGACGGGATAGTAGTTTCGAGAGATGACCTGGTCCAAGTTCTTGG 164766 Query 213412 TGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCA 213471 || | || || |||| | | || | || |||| ||||| ||| | || || Sbjct 164767 TGACGACCTTTGTGATCTCGTGGAGCTTCT------TGAAGTCGTAGACCCGCTTCTCCA 164820 Query 213472 ------CAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGT 213525 | || | || ||||||| | ||| || || || || || ||||| | || Sbjct 164821 TGTCGACGAAAGCGGGGAGGGCGAGGGAGGCAAGATTACAGACAGCAACCTCGTCAGGCG 164880 Query 213526 CTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGT 213585 | | |||||| || |||||||| || |||||| | || || || || || | || | Sbjct 164881 CAGAGTACTCGATAATCTCGGTACAAAGGTTGGAGGATTTAATCGTACCGAGATGTTGCT 164940 Query 213586 GGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCT 213645 |||| || || ||||| |||| ||||||||||||||| |||| || ||||| || Sbjct 164941 GGTTCGATTTGGCGTTCGCAGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCGGTCT 165000 Query 213646 GGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGG 213705 | | | | || || | |||||| | | || |||| | | | | ||| Sbjct 165001 GAGCCTCGAGGATGGCGAACCAGAGCTTCTGAGCTTTGATGGTCTTTC-GCCCCTTCCCA 165059 Query 213706 GCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG---ACCCTGTCCA 213762 || | ||||||| ||||| ||| | | ||| | | || || || | | | Sbjct 165060 GCCTT--CTCGTACGACTCGTACAGCGCCTCGAACTTCT---CCGAGTGAACATCGGCGA 165114 Query 213763 GTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGC 213821 | || || || |||||||||||||||| ||||||| |||| | ||| ||| | || | Sbjct 165115 GACCGGGGCACTCTGCGGGACACATGAGGGTCCAGTCACCGTCCGACTC-GACACGCTTC 165173 Query 213822 ATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACT 213881 ||||| ||||| | || ||| || ||| ||||||||||| | | ||| || Sbjct 165174 ATGAAGAGGTCGGAGATCCAGAGGGCGTAGAACAGGTCCCGAGCACGGACCTCTTCTTTA 165233 Query 213882 CCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAG 213941 || ||| || | || || || || || |||||||| |||||||| ||||| | |||| Sbjct 165234 CCGTGGTTCTTCCTCAAGTCGAGGAACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAG 165293 Query 213942 ATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTG 213998 ||||| || || ||||| | |||| || || ||||| || | ||| || Sbjct 165294 ATGGCGAACGCACCCGGTCGCTTGTTTCCACCTTGGTCGACATATCGCGCCGTGGCGTCA 165353 Query 213999 AAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAG 214058 ||| ||| || | ||| || | ||||| || | |||||||| || || ||||||||| Sbjct 165354 AAGGCGCGGAGCATGGGAACGATACCGTTCGAGTAACCGTTGGTACCGGCAATATACGAG 165413 Query 214059 CCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATG 214118 || || | | |||| ||| ||| || || || ||||| |||||||||| Sbjct 165414 CCCTTAGCGCGGACGTTGTGGATGTGGAGTCCGATTCCTCCGGCAGTCTTGGAGATCTGC 165473 Query 214119 GCGCAG 214124 |||||| Sbjct 165474 GCGCAG 165479 >seq1 Length=4122216 Score = 183 bits (202), Expect = 6e-41 Identities = 187/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | |||||||||||| |||| | || || || ||| ||||||| ||||||||| Sbjct 3090423 AGAGGAGGCAGGCAAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTGGAGA 3090364 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || |||||| ||||||| || | || ||||||||||| || | ||||| ||||| | Sbjct 3090363 AGGTGAGACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGG 3090304 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| ||||| || || || || ||| |||| | ||| |||| | | |||| Sbjct 3090303 AGAAGAAGATACCCTCGACGGCGGCAAAGGCGATGAGGCGCTCGGCGAAGGTGGACTTCT 3090244 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 ||||| ||||| ||||||||||| ||||||||||||||||| || || || || | Sbjct 3090243 CGTCTGTAATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGA 3090184 Query 48363 TGGC 48366 |||| Sbjct 3090183 TGGC 3090180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532194503680