Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq9 269 5e-67 seq1 201 2e-46 >seq9 Length=941136 Score = 269 bits (298), Expect = 5e-67 Identities = 815/1243 (66%), Gaps = 33/1243 (3%) Strand=Plus/Plus Query 221406 CGCAAGACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTC 221464 |||| ||| || || ||||| ||||||||||| ||||| |||||| |||||||| || Sbjct 164554 CGCACGAC-GCCTCGAGGGCGGCGTGGTAGATTGTCTCGAAGATCTGGATGTTGAGT-TC 164611 Query 221465 TTG-GCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTG 221523 | || ||||||| ||||||||| || || | ||| | ||||| || ||||| Sbjct 164612 GCGAGCGGCGGGAGATTCGAAGGGCATGCGGAGAGCCATGAAGGCATCGGCGAGACCCTG 164671 Query 221524 TACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATA 221583 || |||| ||||| ||| | ||| | | ||||||| ||| || |||||||| Sbjct 164672 GACACCGAGACCGACGGGGCGGTGGCGCATGTTGGAGTTCTGCGCCTCGATGACGGGATA 164731 Query 221584 AAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAG 221643 |||| ||| | | || | |||| |||| ||| || | |||| || Sbjct 164732 GTAGTTTCGAGAGATGACCTGGTCCAAGTTCTTGGTGACGACCTTTGTGATCTCGTGGAG 164791 Query 221644 CTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAG 221703 ||||| | | | | ||| || | |||| || |||||| || Sbjct 164792 CTTCTTGAAGTCGTAGACCCGCTTCTCCATGTCG------------ACGAAAGCGGGGAG 164839 Query 221704 GGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTC 221763 ||| | | ||| || ||||| || || |||||||| | |||| || ||||| Sbjct 164840 GGCGAGGGAGGCAAGATTACAGACAGCAACCTCGTCAGGCGCAGAGTACTCGATAATCTC 164899 Query 221764 TGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGC 221823 ||||| |||||| | | || || || || || || | || || || ||| || || Sbjct 164900 GGTACAAAGGTTGGAGGATTTAATCGTACCGAGATGTTGCTGGTTCGATTTGGCGTTCGC 164959 Query 221824 AGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC 221883 |||||||||||||||||| ||||||||||||||||| ||||||| | || || | Sbjct 164960 AGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCGGTCTGAGCCTCGAGGATGGCGAA 165019 Query 221884 CCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATAC--CC 221940 |||||| | |||| || | | ||| | | | | || | | ||| || ||| | Sbjct 165020 CCAGAGCT-TCTGAGCTTTGATGGTCTT--TCGCCCCTTCC-CAGCCTTCTCGTACGACT 165075 Query 221941 GGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGG 222000 ||| || || | | ||||| || || | ||| | || || || ||| ||||| Sbjct 165076 CGTACAGCGCCT--CGAACTTCTCCGAGTGAACATCGGCGAGACCGGGGCACTCTGCGGG 165133 Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060 |||||| || |||||| || | ||| | || |||||||||||| | |||||| Sbjct 165134 ACACATGAGGGTCCAGTCACCGTCCGACTCGACACGCTTCATGAAGAGGTCGGAGATCCA 165193 Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120 || || | || || || | | || ||| || |||| ||| ||||||| || Sbjct 165194 GAGGGCGTAGAACAGGTCCCGAGCACGGACCTCTTCTTTACCGTGGTTCTTCCTCAAGTC 165253 Query 222121 CAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCG 222180 | ||||| || ||||| |||||||| ||||| || |||| ||| | || || ||||| Sbjct 165254 GAGGAACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAACGCACCCGGTCG 165313 Query 222181 CTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTAC 222240 |||||| ||||| || || || | | || |||| ||| ||| || | || || Sbjct 165314 CTTGTTTCCACCTTGGTCGACATATCGCGCCGTGGCGTCAAAGGCGCGGAGCATGGGAAC 165373 Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACT 222300 | ||||| || ||||||||| || ||| |||| || || | | ||| | Sbjct 165374 GATACCGTTCGAGTAACCGTTGGTACCGGCAATATACGAGCCCTTAGCGCGGACGTTG-T 165432 Query 222301 GGCAGACATG-CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359 || | | ||||| || ||||| || |||||| |||||| ||||||| || | Sbjct 165433 GGATGTGGAGTCCGATTCCTCCGGCAGTCTTGGAGATCTGCGCGCAGGTCTTGAGGGTCT 165492 Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG 222419 | ||| ||||| || ||||| ||||| | | | || || || || ||||| || | Sbjct 165493 CGTAGATCCCCTCAATCGAGTCGTCCTTCATGGCGACAAGGAAGCAGGATGACATTTGGG 165552 Query 222420 ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACA 222479 |||| || || |||||| || || || || |||||| || ||||| | | ||||| Sbjct 165553 GGTTGGGGGTACCGGCGTTGAAGAGGGTAGGGGAGGCGTGGGTGAAGTATCGCTCAGACA 165612 Query 222480 TCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATC 222539 | |||| ||| ||||| | ||| || | |||||| | ||||| || | ||| | Sbjct 165613 TGAGATTGTAAGTCTCAATGACCTTGTCAATGTTGGCACCGTGGATACCGACGGCAACAC 165672 Query 222540 TCATGTACATGTACTGGGGCCTCTCCACAGG---ACCCTTGGAGCTGGAGAGCAGGTACG 222596 |||| ||||| |||||| | || || ||| ||| || || || ||||| | Sbjct 165673 GCATGATCATGTGCTGGGGACGTTCGACGATTTTACCGTTGACGC--GA-AGGAGGTAGG 165729 Query 222597 ATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639 || || || || ||||| |||||||||||| ||||||| Sbjct 165730 ATCGCTCGAGGGTTTTGAAACCAAAGTAGTTGTAAGCAAAGTC 165772 >seq1 Length=4122216 Score = 201 bits (222), Expect = 2e-46 Identities = 253/340 (74%), Gaps = 13/340 (4%) Strand=Plus/Plus Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 || |||| |||||||| ||| ||| ||||||||| |||||| ||||| ||||| Sbjct 3090171 CTCTTTGACGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTGAAG 3090230 Query 25846 TGGATCAACAGCC-AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGA 25904 ||||| | ||| | ||| | || || | |||||| || | |||||||| || || || Sbjct 3090231 TGGATTA-CAGACGAGAAGTCCACCTTCGCCGAGCGCCTCATCGCCTTTGCCGCCGTCGA 3090289 Query 25905 GGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CA 25963 ||| ||||| ||| ||| || || || ||||||||||||||||| || | |||| || Sbjct 3090290 GGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAG-CGTGGACTCA 3090348 Query 25964 TGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATT 26023 ||||||| || ||| ||||||||||||||| | | || ||||||||||||| || | Sbjct 3090349 TGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGGTCTCCACACCGACT 3090408 Query 26024 TTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAA---CCTTCTCAAGAGACCGTCT 26080 |||||||||| |||| | | |||| |||| || | || | ||| ||| || Sbjct 3090409 TTGCCTGCCTCCTCTTCTC---CCAC---CTCCGCAGACGGCCATGCGCAGACACCATCA 3090462 Query 26081 ACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 ||| |||||||| ||||||||| |||||||| ||||||| Sbjct 3090463 ACAAAATCATCAAGGAGGCTGTGAAGATCGAGCAGGAGTT 3090502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844196250880