Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2 315 9e-81 seq1 170 3e-37 seq4 143 4e-29 seq7 122 1e-22 seq14 96.9 5e-15 seq9 86.0 8e-12 >seq2 Length=1757930 Score = 315 bits (348), Expect = 9e-81 Identities = 875/1348 (65%), Gaps = 62/1348 (5%) Strand=Plus/Plus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 ||||| ||||| |||||| || ||||| ||||| ||| | || ||||| || ||||| Sbjct 715300 TGTGTCGGTGTGTGGCAATCCGACCGTGTCGAGATCATCGCCAACGACCAGGGTAACCGA 715359 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 || || || || || |||||||| | || ||| |||||| |||| |||||||| || Sbjct 715360 ACCACACCCTCCTATGTTGCCTTCAACGACTCTGAGCGTCTCATTGGTGATGCCGCCAAG 715419 Query 195452 AATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGC 195511 || ||| || |||||||| ||| || || || ||||| ||||| | ||||| || Sbjct 715420 AACCAGGTCGCCATGAACCCCTACAACACCGTTTTCGACGCCAAGCGATTGATTGGCCGA 715479 Query 195512 AAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC-- 195569 ||||| ||| | ||||| | ||| || ||| ||||| | | | ||| | || Sbjct 715480 AAGTTCGGTGATGCTGAGGTCCAGGCCGACATGAAGCACTGGCCCT-TCAAGATCATCGA 715538 Query 195570 CCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTG 195629 | | | ||| ||||| || ||| | ||||| | | || ||| |||| || |||| Sbjct 715539 CAAGGGAGGC----AAGCCAATCATTCAGGTTGAGTACAAGGGCGAGGAGAAGCAGTTTG 715594 Query 195630 C---------------------------------------------TCCC--GAAGAAAT 195642 |||| || || || Sbjct 715595 TAAGTCGATCATTCAAAAGGAGCTAGAGACAGTTGCTAACCATCAGTCCCCTGAGGAGAT 715654 Query 195643 TTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGT 195702 ||| || ||||| ||||| |||||||||||||| || || | | | | ||| ||| || Sbjct 715655 TTCATCCATGGTCTTGATCAAGATGAAGGAGACCGCTGAGGCCTACCTCGGTGGAACCGT 715714 Query 195703 GAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAA 195762 | | || ||||| || || || || ||||||| || || || || ||||| || || Sbjct 715715 CACCAAGGCCGTTGTCACCGTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAA 715774 Query 195763 GGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGC 195822 |||||||| | || || ||||| || || |||| ||||| || || || || || Sbjct 715775 GGACGCTGGTCTCATCGCCGGTCTTGACGTCCTCCGAATCATCAACGAGCCCACCGCCGC 715834 Query 195823 TGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGA 195882 ||| || || || ||||| |||||||| || | || || || || | ||||| || Sbjct 715835 TGCCATCGCCTACGGTCTCGACAAGAAGTCAGAGGGCGAGAAGAACGTCCTCATCTTCGA 715894 Query 195883 TCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGT 195942 |||||| ||||| || || |||||||| || |||| || || | ||||| ||||| || Sbjct 715895 TCTCGGAGGTGGAACCTTCGATGTCTCCCTGCTCACCATCGAGGAGGGTATCTTCGAGGT 715954 Query 195943 AAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCG 196002 ||||| || || ||||| ||||| | |||||||| || ||||| || | || Sbjct 715955 CAAGGCCACCGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGATTGGTCAA 716014 Query 196003 TCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGG 196061 || || ||| | |||||| || ||||| ||||| || | || || | | | Sbjct 716015 CCACTTCGTC-CAGGAGTTCAAGCGTAAGAACAAGAAGGACTTGTCCTCCAACGCCCGAG 716073 Query 196062 CTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTC 196121 | || ||||| || | ||||| || || || ||||| ||||| || || || | || | Sbjct 716074 CCCTCCGTCGTCTCCGAACTGCTTGCGAGCGAGCCAAGCGAACCCTTTCCTCCGCCGCCC 716133 Query 196122 AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCC 196181 | || | ||||| || || | || ||||| |||||||||| || | || |||| Sbjct 716134 AGACCTCCATCGAGATCGACTCCCTCTTCGACGGTGTTGACTTCTACACTTCCATCACCC 716193 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAAC 196241 |||| || || || ||| | | || | || | ||||| || || || Sbjct 716194 GTGCCCGATTCGAGGAGCTCTGCCAGGACCTCTTCCGATCCACCATGGACCCCGTGGAGA 716253 Query 196242 AAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAG 196301 | || || || ||| | ||||| || ||| | || | || || ||||| || || | Sbjct 716254 AGGTCCTCCGCGACTCCAAGATCGACAAGGCCTCCGTCCACGAGATCGTCCTCGTCGGTG 716313 Query 196302 GATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATT 196361 | || |||||||| || || || || || | |||| | |||| | || Sbjct 716314 GTTCCACCCGTATCCCCAAAATCCAGAAGCTTGTTTCCGACACCTTCTCTGGCCGTGAGC 716373 Query 196362 TAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTA 196421 |||| | |||||||| ||||| || || || || ||||| || || ||||| |||| Sbjct 716374 CCAACAGGTCCATCAACCCCGATGAGGCCGTCGCCTACGGTGCCGCTGTCCAGGCCGCTA 716433 Query 196422 TTCTCTCAGGTGTTGACAATAATAACG---TCCAAGATCTTCTGCTACTTGATGTTGCAC 196478 | || | || ||||| | | ||| || || ||||| || ||||| || | Sbjct 716434 TCCTTACCGG---TGACACCTCCGAGGCTACCCAGGACCTCCTGCTCCTCGATGTCGCTC 716490 Query 196479 CCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACA 196538 || | || ||||| | || || || || ||| | |||||| | ||| | || |||| Sbjct 716491 CCTTGTCGATGGGTATCGAGACCGCCGGCGGTATCATGACTCCCCTCATTAAGAGAAACA 716550 Query 196539 CAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTG 196598 | ||| | || || |||||| || |||| || || || ||||| || || || |||| Sbjct 716551 CCACTGTCCCCACCAAGAAGTCCGAAATCTTCTCCACCTACTCCGACAACCAGCCCGGTG 716610 Query 196599 TTCATATTCAAGTATATGAAGGAGAACG 196626 | | ||| || || || || || || || Sbjct 716611 TGCTTATCCAGGTCTACGAGGGTGAGCG 716638 >seq1 Length=4122216 Score = 170 bits (188), Expect = 3e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || ||||| ||||||||||| || ||||| Sbjct 3074231 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACCATCACCCTCGAAGTCGAGTCCAGC 3074172 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | ||||||||||| || || || || || ||||| || || ||| Sbjct 3074171 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAG 3074112 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | ||||| || || |||||||| ||||| || || || || | || |||||| Sbjct 3074111 CAGCGATTGATTTTCGCCGGCAAACAGCTCGAAGACGGGCGAACGCTTTCCGACTACAAC 3074052 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||||||||| || ||||| ||||| Sbjct 3074051 ATCCAGAAGGAGTCTACACTTCACCTCGTTCT 3074020 Score = 145 bits (160), Expect = 1e-29 Identities = 140/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || ||||| ||||| || || || ||||||||||| |||||||||| Sbjct 3074510 GTATGCAGATCTTCGTCAAAACTCTTACCGGCAAGACAATCACCCTCGAAGTTGAGTCGT 3074451 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| || || || |||| || |||||||| || ||||| || || ||||| || | Sbjct 3074450 CCGACACCATTGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCACCAGACC 3074391 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| ||| | ||||| |||||||| || | || ||||| || || || | || |||| Sbjct 3074390 AGCAGCGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGCCGCACTCTTTCCGACTACA 3074331 Score = 116 bits (128), Expect = 5e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || ||||| || ||||| ||||| ||||||||||| ||||| ||||| || |||| || Sbjct 3073648 ACCGGAAAGACCATCACTCTCGAAGTTGAGTCGTCCGACACGATCGACAATGTCAAGGCG 3073589 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| || || || || || ||||||||||| || ||||| || || Sbjct 3073588 AAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAACGACTCATCTTTGCCGGGAAG 3073529 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || | || | || |||||| | || |||||| || || ||| Sbjct 3073528 CAGCTAGAGGACGGGAGGACGTTGAGCGACTACAACATCCAGAAGGAGAGCACCCTGCAC 3073469 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 | || | | || || |||||| Sbjct 3073468 TTGGTGTTGCGTCTCCGTGGTGGT 3073445 Score = 114 bits (126), Expect = 2e-20 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 || || |||||||| || || || || ||||||||||| ||||| || ||||| || || Sbjct 3075090 GTCAAGACCCTTACCGGCAAGACCATTACCCTCGAGGTCGAGTCCTCGGACACCATTGAC 3075031 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 ||| |||| |||||||| || || ||||| || || || || || ||||| ||| | || Sbjct 3075030 AACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGATTGATC 3074971 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || || || || ||| | || || || || ||| | ||||||||| Sbjct 3074970 TTCGCCGGCAAGCAGTTGGAGGACGGCCGAACCTTGTCTGATTACA 3074925 >seq4 Length=1296710 Score = 143 bits (158), Expect = 4e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 171882 CCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAA 171941 |||||| || || || ||||||||||| || |||||||| ||||| || || || |||| Sbjct 543304 CCTTACGGGCAAGACGATCACCCTCGAAGTCGAGTCGTCCGACACCATTGACAATGTCAA 543245 Query 171942 AGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGG 172001 |||||||| || || ||||| || || || || || ||||| || || || || || || Sbjct 543244 GGCCAAGATCCAGGACAAGGAGGGTATCCCTCCAGACCAGCAGCGGCTCATCTTCGCCGG 543185 Query 172002 TAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCT 172061 || |||||||| || || | ||||| | || |||||| | || ||||||||||| || Sbjct 543184 CAAGCAGCTTGAGGACGGCAGGACCCTTTCCGACTACAACATCCAGAAGGAGTCTACCCT 543125 Query 172062 ACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 ||||| || | || | ||||||||| Sbjct 543124 CCACCTGGTGTTGAGATTGAGGGGTGGTG 543096 >seq7 Length=1170885 Score = 122 bits (134), Expect = 1e-22 Identities = 120/154 (78%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 171872 TTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCG 171931 |||| || | |||||| || || || |||||||||||||| ||||| || ||||| |||| Sbjct 1015367 TTGT-AATAGCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCG 1015425 Query 171932 ATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTA 171991 | ||| |||| |||||||| || || ||||| || || ||||| || ||||| ||| | | Sbjct 1015426 ACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCAGACCAGCAGCGATTGA 1015485 Query 171992 TTTTTGCTGGTAAACAGCTTGAAGATGGACGTAC 172025 |||| || || || ||| | || ||||| || || Sbjct 1015486 TTTTCGCCGGAAAGCAGTTGGAGGATGGCCGGAC 1015519 >seq14 Length=393752 Score = 96.9 bits (106), Expect = 5e-15 Identities = 226/332 (68%), Gaps = 18/332 (5%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| ||||| | ||| | | |||||| | || || | || || | ||| Sbjct 329491 AAGATGAAGGATACTGCTGCTGCTTACCTCGGTAAACCAGTCAAGCACGCCGTCATCACT 329432 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || |||||||| | | ||||| Sbjct 329431 GTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCGGGTCCATTGCC 329372 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 ||||| | ||| || || | ||||| || || || || ||||| | ||||| ||||| Sbjct 329371 GGTCTCGA-TGTCCTCCGAGTCATCAACGAGCCCACTGCCGCTGCTCTCGCTTACGGTCT 329313 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGT-ATTGATCTTT--GATCTCGGTGGTGGTAC 195897 ||||| | | |||| | ||| |||| ||| |||||||| ||||| || Sbjct 329312 CGACAA-ATC--GGACTCTG------CTGTCATTGCAGTTTACGATCTCGGAGGTGGAAC 329262 Query 195898 GTTTGATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || |||||||| | ||| | || |||| ||| | || || || ||| | || Sbjct 329261 TTTCGATGTCTCGATCCTCGAGATGCAGAAG--GGTGTCTTTGAGGTCAAGTCGACCAAC 329204 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || || || ||||| || || || || Sbjct 329203 GGTGACACCCACCTCGGTGGCGAGGACTTTGA 329172 >seq9 Length=941136 Score = 86.0 bits (94), Expect = 8e-12 Identities = 218/327 (67%), Gaps = 11/327 (3%) Strand=Plus/Minus Query 78050 CACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTC 78109 ||||| | ||||| | || || || ||||| ||| || || |||||||| || ||| Sbjct 165592 CACGCCTCCCCTACCCTCTTCAACGCCGGTACCCCCAACCCCCAAATGTCATCCTGCTTC 165533 Query 78110 CTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAG-TGTGC 78168 || | || | ||||| ||||| ||| | || || |||| ||| |||| ||| || || Sbjct 165532 CTTGTCGCCATGAAGGACGACTCGATTGAGGGGATCTACGAGACCCTCA-AGACCTGCGC 165474 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAA 78228 ||||| || ||| || || || || || || || || ||| | || || || || Sbjct 165473 GCAGATCTCCAAGACTGCCGGAGGAATCGGACTCCACATCCACAACGTCCGCGCTAAGGG 165414 Query 78229 GTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATT 78288 || ||| || || || ||| | || | || || |||| ||||| | | || Sbjct 165413 CTCGTATATTGCCGGTACCAACGGTTACTCGAACGGTATCGTTCCCATGCTCCGCGCCTT 165354 Query 78289 CAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGGAAG-----GGGT-CATTCGC 78342 | || || || || |||||| |||||| || | | ||| |||| | ||||| Sbjct 165353 TGACGCCACGGCGCGATATGTCGACCAAG---GTGGAAACAAGCGACCGGGTGCGTTCGC 165297 Query 78343 TATGTACCTTGAACCTTGGCACGCCGA 78369 || ||||| || || ||||||||||| Sbjct 165296 CATCTACCTCGAGCCCTGGCACGCCGA 165270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861972389440