Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 >seq1 Length=4122216 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| ||||| || || |||||||| || ||| | Sbjct 3074231 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACCATCACCCTCGAAGTCGAGTCCAGC 3074172 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| | |||||||| |||||||| || || || || || || Sbjct 3074171 GACACCATCGACAACGTTAAAGC-CAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCA 3074113 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||| || ||||| |||||||| || || | ||| | || || || || Sbjct 3074112 GCAGCGATTGATTTTCGCCGGCAAACAGCTCGAAGACGGGCGAACGCTTTCCGACTACAA 3074053 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || ||||| ||| | || |||||||| | ||||| Sbjct 3074052 CATCCAGAAGGAGTCTACACTTCACCTCGTTCTGCGATTGAGGGGAGG 3074005 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || || |||||||| || | ||||||| | || | || || Sbjct 3073648 ACCGGAAAGACCATCACTCTCGAAGTTGAGTCGTCCGACACGATCGACAATGTCAAGGCG 3073589 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || || || || || ||||| | |||||||||||||| Sbjct 3073588 AAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAACGACTCATCTTTGCCGGGAAG 3073529 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| ||| | || || || ||||| || ||||| || || ||| Sbjct 3073528 CAGCTAGAGGACGGGAGGACGTTGAGCGACTACAACATCCAGAAGGAGAGCACCCTGCAC 3073469 Query 24908 TTGGTGTTGCG 24918 ||||||||||| Sbjct 3073468 TTGGTGTTGCG 3073458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897307566560