Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 206 4e-47 seq9 170 3e-36 >seq1 Length=4122216 Score = 206 bits (228), Expect = 4e-47 Identities = 215/279 (77%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 794362 TCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAG 794421 |||||| ||| ||| ||||||||||| || |||||||||||||| ||||||| | Sbjct 3090373 TCGTTGGAGAAGGTGAGACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGAGGCG 3090314 Query 794422 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAA 794481 || ||| ||||| ||||| |||||||||||||||||| ||| ||| |||||||| || Sbjct 3090313 AAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCAAAGGCGATGAGGCGCTCGGCGAAG 3090254 Query 794482 GTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAG 794541 ||| | ||| | | |||||||||| |||||| || ||||| ||| | | || Sbjct 3090253 GTGGAC---TTCTCGTCTGTAATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGATGCAG 3090197 Query 794542 GGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCTCGACCGGGTCCTTGACGTAGGT 794600 || | |||||||||||| |||||||| ||||| | | | |||||||||| |||||| Sbjct 3090196 GGGATGGTGTCGATGGCGTCAAAGAGGTAGGTCCGGCGAG-CGGGGTCCTTGATGTAGGT 3090138 Query 794601 GTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 ||| || ||||| ||||||||||| |||||||| || || Sbjct 3090137 GTCAATAAGGAGGGAGTAGGTCTCGGAGTGGATATTCTC 3090099 >seq9 Length=941136 Score = 170 bits (188), Expect = 3e-36 Identities = 192/257 (75%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||||||||| ||||||||| ||| |||| ||||||||||||| || | ||||| || Sbjct 165327 TGGTCGACATATCGCGCCGTGGCGTCAAAGGCGCGGAGCATGGGAACGATACCGTTCGAG 165386 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | |||||||| || || | || | |||| ||||| || ||||| | | ||| Sbjct 165387 TAACCGTTGGTACCGGCAATATACGAGCCCTTAGCGCGGACGTTGTGGATGTGGAGTCCG 165446 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||| | ||||||||| ||||||| | || || ||||||||||| ||||| Sbjct 165447 ATTCCTCCGGCAGTCTTGGAGATCTGCGCGCAGGTCTTGAGGGTCTCGTAGATCCCCTCA 165506 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 ||||||||| |||||||| | | || ||||| || || |||| ||| | || ||| Sbjct 165507 ATCGAGTCGTCCTTCATGGCGACAAGGAAGCAGGATGACATTTGGGGGTTGGGGGTACCG 165566 Query 2073781 GCATTGAAGAGCGTGGG 2073797 || |||||||| || || Sbjct 165567 GCGTTGAAGAGGGTAGG 165583 Score = 107 bits (118), Expect = 3e-17 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860 || ||||| ||| | || || | ||| | |||||| ||| | | | | || || | Sbjct 165114 AGACCGGGGCACTCTGCGGGACACATGAGGGTCCAGTCACCGTCCGACTCGACACGCTTC 165173 Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920 || || |||||| | |||| ||| |||| || || || || || ||| ||| || || Sbjct 165174 ATGAAGAGGTCGGAGATCCAGAGGGCGTAGAACAGGTCCCGAGCACGGACCTCTTCTTTA 165233 Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 ||||||||||| ||| |||||| | |||| || |||||||||||| ||||| |||||| Sbjct 165234 CCGTGGTTCTTCCTCAAGTCGAGGAACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAG 165293 Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTG 2072004 ||| || || ||| |||||| Sbjct 165294 ATGGCGAACGCACCCGGTCGCTTG 165317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916240868522828