Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 >seq1 Length=4122216 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| ||||| || | ||||| || || || || || ||||| || || | | Sbjct 3074005 CCTCCCCTCAATCGCAGAACGAGGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAA 3074064 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || ||||| |||||||| || | ||||||| ||||| || || ||| Sbjct 3074065 AGCGTTCGCCCGTCTTCGAGCTGTTTGCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGA 3074124 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||||||||| || | || ||| || | || | ||||| || ||| Sbjct 3074125 ATACCCTCTTTGTCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCGCTGGACTCGACT 3074184 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || |||||||| || | ||| || || || ||||||||| Sbjct 3074185 TCGAGGGTGATGGTTTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 3074232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218955867332