Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 1e-12 seq4 86.0 1e-11 >seq9 Length=941136 Score = 89.7 bits (98), Expect = 1e-12 Identities = 170/248 (69%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 ||||||||||||| |||||||| ||| ||| | |||||| | | ||| | | Sbjct 164961 GCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCGGTCTGAGCCTCGAGGATGGCGAAC 165020 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | || ||||| | ||| ||| | | | || | || ||||| ||| || Sbjct 165021 CAGAGCTTCTGAGCTTTGATGGTCTTTCGCCCCTTCCCAGCCTTCTCGTACGACTCGTAC 165080 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTC-GGACAAAA 173285 || | ||||| | || | || || ||| | |||||||| || || | ||||| | Sbjct 165081 AGCGCCTCGAACTTCTCCGAGTGAACATCGGCGAGACCGGG-GCACTCTGCGGGACACAT 165139 Query 173286 GAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGC 173345 ||| |||| | || || | |||||| | |||||||||||||||||| |||| | || Sbjct 165140 GAGGGTCCAGTCACCGTCCGACTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGGC 165199 Query 173346 GTAGAACA 173353 |||||||| Sbjct 165200 GTAGAACA 165207 >seq4 Length=1296710 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAG 206250 || || || || |||||||| | ||||| || || ||||| | || || ||| Sbjct 543303 CTTACGGGCAAGACGATCACCCTCGAAGTCGAGTCGTCCGACACCATTGACAATGTCAAG 543244 Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310 ||||| || || || || || || || ||| || | || ||||||||||| Sbjct 543243 GCCAAGATCCAGGACAAGGAGGGTATCCCTCCAGACCAGCAGCGGCTCATCTTCGCCGGC 543184 Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 |||||| | || || || ||||| | |||| |||||| ||||||| |||||||| || Sbjct 543183 AAGCAGCTTGAGGACGGCAGGACCCTTTCCGACTACAACATCCAGAAGGAGTCTACCCTC 543124 Query 206371 CACCTTGTTTTGAGA 206385 ||||| || |||||| Sbjct 543123 CACCTGGTGTTGAGA 543109 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816 |||||| || ||||| || |||||||| ||||||| || ||||| | | ||||| || Sbjct 543109 TCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTCCTGCC 543168 Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || || |||||||| ||||||||||| ||||| || || Sbjct 543169 GTCCTCAAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTG 543207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820012611892