Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 206 4e-47 >seq1 Length=4122216 Score = 206 bits (228), Expect = 4e-47 Identities = 209/266 (79%), Gaps = 11/266 (4%) Strand=Plus/Plus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || || |||||||| || |||||||| ||||| || ||||||||| |||||||||| | | Sbjct 3090099 GAGAATATCCACTCCGAGACCTACTCCCTCCTTATTGACACCTACATCAAGGACCCCG-C 3090157 Query 1456075 GAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGA 1456133 | ||||| |||||||| |||||||||||| | || | | | ||| |||||||| Sbjct 3090158 TCGCCGGACCTACCTCTTTGACGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCCGA 3090217 Query 1456134 CTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTC 1456190 ||||||| |||||||||| | || || || || || ||| |||||||| ||| || Sbjct 3090218 CTGGGCGCTGAAGTGGATTACAGACGAGAAG----TCCAC-CTTCGCCGAGCGCCTCATC 3090272 Query 1456191 GGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTC 1456249 | ||||||||| |||||||| ||||| ||||| ||| ||| | ||||||| |||||| Sbjct 3090273 GCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTC 3090332 Query 1456250 AAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||| || |||||||||||||| Sbjct 3090333 AAGAAGCGTGGACTCATGCCCGGTCT 3090358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177806184504424