Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq4 105 6e-18 >seq1 Length=4122216 Score = 120 bits (132), Expect = 3e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | |||||| |||| || ||||| || || || || Sbjct 3074040 CTCCTTCTGGATGTTGTAGTCGGAAAGCGTTCGCCCGTCTTCGAGCTGTTTGCCGGCGAA 3074099 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| | ||| |||||| |||| || |||| | || Sbjct 3074100 AATCAATCGCTGCTGGTCTGGGGGAATACCCTCTTTGTCCTGGATC-TTGGCTTTAACGT 3074158 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||||| || || || || | ||||| ||||| || || | || |||| Sbjct 3074159 TGTCGATGGTGTCGCTGGACTCGACTTCGAGGGTGATGGTTTTGCCGGTGAGGGTCTTCA 3074218 Query 35724 CAAATATCTGCATTC 35738 | || |||||||||| Sbjct 3074219 CGAAGATCTGCATTC 3074233 >seq4 Length=1296710 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || |||||||||| || | ||| |||||| || |||||||| |||| Sbjct 543098 CCACCCCTCAATCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAA 543157 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| | |||| || |||||||| || || || || | |||||||||||| | ||| Sbjct 543158 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCTGGAGGG 543217 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | |||||| ||| || || Sbjct 543218 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGACGACTCGACT 543277 Query 35690 TCCACCGTGATCGTTTTACCCGT 35712 || | |||||||| || ||||| Sbjct 543278 TCGAGGGTGATCGTCTTGCCCGT 543300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793306984160