Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 >seq1 Length=4122216 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || |||||||| | || || || ||||| || | | Sbjct 3074231 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACCATCACCCTCGAAGTCGAGTCCAGC 3074172 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || || || |||||||| || || || || || || Sbjct 3074171 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAG 3074112 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCG-TTTCCGATTACAA 27166 ||||| || || | |||||||||||| | |||||| | ||| || ||||||| ||||| Sbjct 3074111 CAGCGATTGATTTTCGCCGGCAAACAGCTCGAAGAC-GGGCGAACGCTTTCCGACTACAA 3074053 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | || | ||| |||| ||| |||| || || Sbjct 3074052 CATCCAGAAGGAGTCTACACTTCACCTCGTTCTGCGATTGAGGGGAGGTAT 3074002 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 27087 GAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGT 27146 || ||||| || || || || |||||| | || | |||||||||||| ||||| ||| | Sbjct 3073854 GAGGGCATTCCCCCAGACCAGCAGCGTCTCATTTTCGCCGGCAAACAGTTGGAGGACGGC 3073795 Query 27147 TCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTG 27206 ||| ||||||| ||||| || || |||||||| || || || ||||| | ||| || Sbjct 3073794 CGAACCCTTTCCGACTACAATATCCAGAAGGAGTCCACTTTGCACTTGGTGCTTCGTCTG 3073735 Query 27207 CGGGGTGGCAT 27217 || ||||| || Sbjct 3073734 CGTGGTGGTAT 3073724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918117303040