Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 >seq1 Length=4122216 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || |||||||| || ||||| ||||| |||||||| || |||| Sbjct 3074232 AATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACCATCACCCTCGAAGTCGAGTCCAG 3074173 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || || ||||| | || | | |||||||| ||| | || ||||| | Sbjct 3074172 CGACACCATCGACAACGTTAAAGCCAAGA-TCCAGGACAAAGAGGGTATTCCCCCAGACC 3074114 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||||| || || || ||||||||||| || ||||||| || || | ||| |||| Sbjct 3074113 AGCAGCGATTGATTTTCGCCGGCAAACAGCTCGAAGACGGGCGAACGCTTTCCGACTACA 3074054 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||| || || ||||| ||| | || | ||| | | ||| | ||||| Sbjct 3074053 ACATCCAGAAGGAGTCTACACTTCACCTCGTTCTGCGATTGAGGGGAGG 3074005 Score = 91.5 bits (100), Expect = 1e-13 Identities = 129/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| || || || || || ||||| ||||||||||| || | Sbjct 3074508 ATGCAGATCTTCGTCAAAACTCTTACCGGCAAGACAATCACCCTCGAAGTTGAGTCGTCC 3074449 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || ||| ||||| || ||| | || ||||| || Sbjct 3074448 GACACCATTGACAATGTCAAGGC-GAAGATTCAGGACAAGGAGGGTATCCCACCAGACCA 3074390 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 ||||| || || || || || || ||| |||| || | |||||| | ||| |||| Sbjct 3074389 GCAGCGATTGATTTTCGCTGGTAAGCAATTGGAGGATGGCCGCACTCTTTCCGACTACA 3074331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009385786416