Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 >seq1 Length=4122216 Score = 102 bits (112), Expect = 7e-17 Identities = 146/204 (72%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 29621 CTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCA 29680 || ||||||||||| ||||||| | ||| || |||||||| || |||||| || ||| Sbjct 2379917 CTTGGCTCCCTCTCCAGCTGAACCATCAAGGGCTCCACGTGATCCTTGTAGACATGTGCA 2379976 Query 29681 TCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGC--CCGGTGACGTGAGCCATCATGT 29738 || |||| | | | |||||| | | || || || || | || || ||||| | Sbjct 2379977 TCGCCCATTTGGAGTATAAACTC--CTTGGCCTCGCATCCCGTCAAATGCGCAATCATAT 2380034 Query 29739 ACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACC 29798 ||||||||||| ||| ||||||||| ||||| || ||||| || | || | || | Sbjct 2380035 GCGTGAGGAGAGCGTAAGAGGCGATGTTGAAGGGGACGCCGAGGCCGAGATCGCAAGAGC 2380094 Query 29799 TCTGGTAGAGCTGGCACGAGAGCT 29822 ||| || | | |||||||||||| Sbjct 2380095 GCTGATACATCAGGCACGAGAGCT 2380118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162942594072