Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 113 6e-20 >seq1 Length=4122216 Score = 113 bits (124), Expect = 6e-20 Identities = 149/203 (73%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || |||||||||||||| |||||||| || |||||||| || || | ||| Sbjct 3090373 TCGTTGGAGAAGGTGAGACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGAGGCG 3090314 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| || || || ||||| ||||| ||| | || | ||| || | Sbjct 3090313 AAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCAAAGGCGATGAGGCGCTCGGCGAAG 3090254 Query 48303 CTGG-CTTC-GTTGTGT-ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| |||| | ||| |||||| | ||||| || ||||||||||| | || || Sbjct 3090253 GTGGACTTCTCGTCTGTAATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGG 3090194 Query 48360 ATTGTTTCTATAGCATTAAAGAG 48382 || || || || || | |||||| Sbjct 3090193 ATGGTGTCGATGGCGTCAAAGAG 3090171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668348465280