Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 2e-14 seq3 87.8 3e-12 >seq1 Length=4122216 Score = 95.1 bits (104), Expect = 2e-14 Identities = 145/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || || ||||| || ||||| ||||||||||| |||||||| || || | ||| Sbjct 3090373 TCGTTGGAGAAGGTGAGACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGAGGCG 3090314 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 || || || || ||||| || || || || || || || |||| || | ||| || | Sbjct 3090313 AAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCAAAGGCGATGAGGCGCTCGGCGAAG 3090254 Query 46792 CTGG-CATC-ATTATG-AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 ||| | || | || ||||||| | | ||||| || ||||| ||||| | || || Sbjct 3090253 GTGGACTTCTCGTCTGTAATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGG 3090194 Query 46849 ATTGTTTCTATAGCATTAAAGAG 46871 || || || || || | |||||| Sbjct 3090193 ATGGTGTCGATGGCGTCAAAGAG 3090171 >seq3 Length=1461739 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 46651 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTT 46710 || ||||||| || || | || || || ||||| | |||||||| || || ||||| Sbjct 1187740 CCCTCATCTCGGCTGATGAGCTCATTGGAGAATGTCAATCCAGGCATCAGACCCCGCTTC 1187681 Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 || | |||||| ||||| ||||| || || || ||||| ||||||||||| ||||| Sbjct 1187680 TTCAACCAAAAGATAGCGGCGAAGGAGCCCGAGAAGAAGATGCCTTCTACGCAAGCGAAA 1187621 Query 46771 GCGACAAG 46778 ||||| || Sbjct 1187620 GCGACTAG 1187613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933936592640