Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 122 2e-22 seq4 102 2e-16 >seq1 Length=4122216 Score = 122 bits (134), Expect = 2e-22 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| |||||||| || ||||||||||| |||| | |||| ||| ||| Sbjct 3074020 AGAACGAGGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTTCGCCCGTCT 3074079 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| |||||||| || | | ||||||||| | | || || || || || Sbjct 3074080 TCGAGCTGTTTGCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGAATACCCTCTTTGTCC 3074139 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAG 152070 || || || ||| || | || | | ||| ||| | ||| ||||| || || || | Sbjct 3074140 TGGATCTTGGCTTTAACGTTGTCGATGGTGTCGCTGGA--CTCGACTTCGAGGGTGATGG 3074197 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||| ||||| ||||||||||||| ||||||| Sbjct 3074198 TTTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 3074232 >seq4 Length=1296710 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| | ||| | || || || || |||||||| || ||||||||||| |||| | || Sbjct 543103 CCTCAATCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGT 543162 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 || || || || || || ||||||||||| |||| ||||||||| | | ||| || Sbjct 543163 CCTGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATACC 543222 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||||| || || || || |||||| | || | | |||| || ||| ||||| || Sbjct 543223 CTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGACGACTCGACTTCGAG 543282 Query 152063 AGTAATAGTTTTGCCCGTGAG 152083 || || || |||||||| || Sbjct 543283 GGTGATCGTCTTGCCCGTAAG 543303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820031266892