Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01]
26 sequences; 20,595,339 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq5 122 9e-23
seq2 89.7 5e-13
>seq5
Length=1923346
Score = 122 bits (134), Expect = 9e-23
Identities = 102/125 (82%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 16984 TCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTT 17043
|||||| |||| ||||||||| ||||| || |||||||| ||||||||| || |||||
Sbjct 661445 TCCCTCATCTCGGCTGATAAGCTCGTTCGAGAATGTCAATCCGGGCATCAGACCACGTTT 661504
Query 17044 CTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAA 17103
||||||||| || || |||||||| || || |||||||| || || ||||| | |||||
Sbjct 661505 CTTTAACCAGAAGATGGCGGCGAAAGATCCCGAAAAGAAGATGCCTTCGACACACGCAAA 661564
Query 17104 CGCGA 17108
||||
Sbjct 661565 AGCGA 661569
>seq2
Length=3428829
Score = 89.7 bits (98), Expect = 5e-13
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 16999 GATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATAT 17058
||| || ||||| || || || | |||||||| || || ||||| | ||| || ||
Sbjct 11581 GATGAGCTCGTTGGAGAAGGTGAGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGAT 11522
Query 17059 CGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTC 17118
| |||||| || || || ||||| ||||||||||||| ||||| ||||| | || ||
Sbjct 11521 GGAGGCGAATGAACCCGAGAAGAAGATACCCTCGACGGCGGCAAAGGCGATGAGACGCTC 11462
Query 17119 GGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTAT 17178
||| | || | | | || ||||| || || |||| |||||||| | ||| ||
Sbjct 11461 AGCGAATGTGGACTTGTCGTCCGTGATCCACTTGAGCGCCCAGTCGGCTTTCTTCTTGAT 11402
Query 17179 GCAATCCATCGTTTCTATGGCCTTAAA 17205
||| || || || ||||| | |||
Sbjct 11401 GCAGGGGATGGTCTCAATGGCGTCAAA 11375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545431797680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |