Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 >seq2 Length=3428829 Score = 127 bits (140), Expect = 2e-24 Identities = 179/249 (72%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || || || ||| ||| |||||||| || | | || | |||||||| || |||||| Sbjct 11616 CAGGCAAAGTCGGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGT 11557 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| || |||||||| || ||||| || ||||| || ||||| || || ||||| Sbjct 11556 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAACCCGAGAAGAAG 11497 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCAT--GT- 24311 || || || || || |||||||| || || | || | | || |||| | || Sbjct 11496 ATACCCTCGACGGCGGCAAAGGCGATGAGACGCTCAGCGAATGTGGACTTGTCGTCCGTG 11437 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 |||||||| | ||||| ||||| ||||| || | || || || ||||| || || | | Sbjct 11436 ATCCACTTGAGCGCCCAGTCGGCTTTCTTCTTGATGCAGGGGATGGTCTCAATGGCGTCA 11377 Query 24372 AAGAGATAG 24380 ||||| ||| Sbjct 11376 AAGAGGTAG 11368 Score = 116 bits (128), Expect = 4e-21 Identities = 431/670 (64%), Gaps = 4/670 (1%) Strand=Plus/Plus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 || ||||| | | |||||| ||||| || || || ||||| ||||| || | ||| Sbjct 3422551 GGGCACATGAGTGTCCACTCGCCGTCCGACTCGACCCGCTTCATGAAGAGGTCCGAGATC 3422610 Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115 || || || || || || | | | ||||| || || ||||| || Sbjct 3422611 CAGAGGGCGTAGAAGAGGTCACGTGCACGGACCTCCTCCTTACCGTGGTTCTTGCGCAGG 3422670 Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175 ||||||||| | | || || | ||||| || || | ||| |||| | | || || Sbjct 3422671 TCGAGGAACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAACGCGCCCGGA 3422730 Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235 |||||||| || ||||| || | ||||| || ||| | | ||| | ||| || Sbjct 3422731 CGTTTGTTACCGCCCTGGTCGACGTATCGCGCCGTGGCGTCGAACGCTCGGAGCATGGGT 3422790 Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 54295 | ||||| || || || ||||| |||| || || ||| |||| || | ||| Sbjct 3422791 ACGATACCGTTCGAGTACCCGTTGGTACCGGCAATGTAAGATCCCTTGGCGCGGACATTG 3422850 Query 54296 CTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-T 54354 || || || ||||| ||||| | || ||||| ||||| ||| || | | | Sbjct 3422851 TGGATGTGGAGTCCGATCCCGCCTGCAGTCTTGGAGATCTGCGCGCA-CGTCTTGAGGGT 3422909 Query 54355 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 54414 |||||||| ||||| || || ||| |||| | || || ||| |||||||| Sbjct 3422910 CTCATAGATACCCTCAATCGAGTCGTCCTTCATCGCCACGAGGAAGCAGGATGACATTTG 3422969 Query 54415 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 54474 | | || || || || || | |||||| |||||||| || || || ||||| Sbjct 3422970 GGGGTTGGGGGTACCGGCGTTGAAGAGGGTAGGGGAAGCGTGGGTGAAGTATCGCTCAGA 3423029 Query 54475 AAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGA 54533 | || ||||| ||||| || | ||| || | || | || || || || |||| Sbjct 3423030 CATGAGGTTGTAGGTCTCAATGACCTTGTCAATGTTGGCACCG-TGGATACCGACAGCGA 3423088 Query 54534 CACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGG 54593 ||||||| | ||||||||| || | || ||||| || ||| | || | ||||| Sbjct 3423089 CACGCATAATCATGTGCTGGGGACGCTCGACGATTTTACCGTTGACGCGAAGGAGGTAGG 3423148 Query 54594 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 54653 || || | || || || ||||| |||||||| | |||||| || | ||| || || Sbjct 3423149 ATCGCTCGAGGGTCTTGAACCCAAAGTAGTTGTAGGCAAAGTCCCGGTTGTAGATGATGG 3423208 Query 54654 CTGAGTTGAG 54663 | |||| ||| Sbjct 3423209 CAGAGTCGAG 3423218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721407040480