Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 118 2e-21 >seq2 Length=3428829 Score = 118 bits (130), Expect = 2e-21 Identities = 188/266 (71%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGC-CGC-CTCCTTAAGAGTATCA 94836 ||||| |||| || || |||||||||||||| ||| ||| | ||| || || ||| Sbjct 3422856 GTGGAGTCCGATCCCGCCTGCAGTCTTGGAGAT--CTGCGCGCACGTCTTGAGGGTCTCA 3422913 Query 94837 TAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGT 94896 || ||||||||||| || || | | ||| |||||||| || || | |||||| Sbjct 3422914 TAGATACCCTCAATCGAGTCGTCCTTCATCGCCACGAGGAAGCAGGATGACATTTGGGGG 3422973 Query 94897 GTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATG 94956 || || || || || || || |||||||| ||||| || || || |||||| Sbjct 3422974 TTGGGGGTACCGGCGTTGAAGAGGGTAGGGGAAGCGTGGGTGAAGTATCGCTCAGACATG 3423033 Query 94957 AGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGC 95016 || | || || |||||||| | |||| | ||||| || |||||||| |||||| Sbjct 3423034 AGGTTGTAGGTCTCAATGACCTTGTCAATGTTGGCACCGTGGATACCGACAGCGACACGC 3423093 Query 95017 ATAATCATGTCCTGAGGGCGCTCAAC 95042 |||||||||| ||| || ||||| || Sbjct 3423094 ATAATCATGTGCTGGGGACGCTCGAC 3423119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583670344830