Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=3588805 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| ||||||||| |||||| || ||||| || || || || || || ||| Sbjct 3580121 TCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGCTGGTCTGGCGGGATACCCTCCTTG 3580180 Query 139670 TCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| | || | || | | || | ||||||| | ||| ||||||| ||| | Sbjct 3580181 TCC-TGAATCTTCGCCTTGACATTGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGAT 3580239 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 |||||||||||| | || || ||||| || |||||| || Sbjct 3580240 CGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCATACCT 3580279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063838779200