Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=3588805 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | |||||| ||||||| || || | || || | |||||||||||||| Sbjct 3579811 CTCCTTCTGGATATTGTAGTCGGACAGCGTGCGGCCATCTTCGAGCTGTTTGCCGGCAAA 3579870 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||||||||||||| || | || | ||| || || || |||| | | || || | Sbjct 3579871 GATCAATCGCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTTACATT 3579930 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | | ||||||| | ||| || || | || || ||||| || || || ||||| || Sbjct 3579931 GTCGATGGTGTCGCTCGACTCAACCTCAAGAGTGATGGTTTTGCCAGTGAGGGTTTTGAC 3579990 Query 43098 AAAAATTTGCATT 43110 ||| || |||||| Sbjct 3579991 AAAGATCTGCATT 3580003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369479153508