Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq7 140 5e-29 seq9 131 3e-26 seq5 122 1e-23 >seq7 Length=1486679 Score = 140 bits (154), Expect = 5e-29 Identities = 100/115 (87%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| |||||||| || ||||| ||||| || |||||||| |||||||||||||||| || Sbjct 302546 AGACAACATCCAGGGTATCACTAAGCCTGCGATCCGTCGATTGGCTCGTCGTGGTGGTGT 302487 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||||||| ||||||| ||| |||| ||||||| ||||| |||||||||||||||| Sbjct 302486 CAAGCGTATCTCTGGTTTGATCTACGAAGAGACTCGTGGTGTTTTGAAGATCTTC 302432 >seq9 Length=1183190 Score = 131 bits (144), Expect = 3e-26 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| |||||||| || ||||||||||| || ||||||||||| || ||||||||||| || Sbjct 832143 AGACAACATCCAGGGTATCACCAAGCCTGCGATCCGTCGTCTCGCCCGTCGTGGTGGTGT 832202 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAA 16578 ||||||| ||||||| | |||| || |||| ||| | ||| |||||||||||||| | Sbjct 832203 CAAGCGTATCTCTGGTCTCATCTACGAGGAGACTCGAGGTGTCTTGAAGATCTTCCTTGA 832262 Query 16579 GACCGTTATC 16588 || ||| ||| Sbjct 832263 GAACGTCATC 832272 >seq5 Length=1923346 Score = 122 bits (134), Expect = 1e-23 Identities = 105/130 (81%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| |||||||| || ||||||||||| || ||||||||||| || ||||||||||| || Sbjct 1053490 AGACAACATCCAGGGTATCACCAAGCCTGCGATCCGTCGTCTCGCCCGTCGTGGTGGTGT 1053431 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAA 16578 ||||||| ||||||| | | || || |||| || | ||| |||||||||||||| | Sbjct 1053430 CAAGCGTATCTCTGGTCTCATTTACGAGGAGACCCGAGGTGTCTTGAAGATCTTCCTTGA 1053371 Query 16579 GACCGTTATC 16588 || ||| ||| Sbjct 1053370 GAACGTCATC 1053361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075176228018