Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 260 2e-64 seq1 125 9e-24 >seq2 Length=3428829 Score = 260 bits (288), Expect = 2e-64 Identities = 891/1380 (65%), Gaps = 29/1380 (2%) Strand=Plus/Plus Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||||| ||||| |||||||| || || | || |||| |||||||| || ||||| Sbjct 3421744 GTGTAGGGCTCGAAGCACTCGTTCCAGCCGAGAATCTGGGAAGTGGAGGCGGTAGGCATA 3421803 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || || | ||| ||| ||| |||| ||| | | | ||||| | ||||| | | Sbjct 3421804 GGGGCAACGAGGAGGGAGTTTCGGACACCGTGCTGCTTAATGGAAGCTCGGAGGGTGGAC 3421863 Query 114074 CAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAG 114133 ||||| || | ||| ||| ||| | ||| |||||||| |||| ||||| Sbjct 3421864 CAGTCCCAGAGGTCGGTTGGGACCCGACCCCAGAGATCGAACTGGAGTTTACCCTGGGAC 3421923 Query 114134 GCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCC 114193 || || ||||| |||||||||| ||| ||| |||| ||| | |||| Sbjct 3421924 ATGGGGGAACCCTCGTATGTCTCGTACTTACCCAGCTCCTGAGCCATCTCGCACGACGCC 3421983 Query 114194 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 114253 |||||||| || || || || ||||| || || | || | | ||| || | Sbjct 3421984 TCGAGGGCGGCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTCGCGGGCGGCGGGG 3422043 Query 114254 GAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 114313 || || || | | || | ||||| | || || ||||| ||||||||||| || Sbjct 3422044 GACTCGAAGGGCATGCGAAGCGCCATAAAGGCGTCGGCAAGACCCTGGACACCGAGACCG 3422103 Query 114314 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG---GGATAAAAATTCCTA 114370 | || || || | ||| || || || | || ||| | | || || | || | Sbjct 3422104 ACGGGACGGTGACGCATGTTGGAGTTCTGCGC---CTCGATGACAGGGTAGTAGTTGCGC 3422160 Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430 ||| ||| | || || |||||||| ||||| |||||||| || ||||| | | Sbjct 3422161 GAGATGACCTGGTCAAGGTTCTTGGTGACGACCTTGGTGATTTCGTGGAGCTTCTTAAAG 3422220 Query 114431 TCAAA-ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 114489 ||| | ||| || |||| | ||| | || ||||||| || || || || || Sbjct 3422221 TCATAGACT-CGCTTCTCCATGTCGACGAATGCGGGGAGGGCGAGGGAGGCAAGGTTGCA 3422279 Query 114490 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 114549 |||| ||| || ||| |||||| ||||| || ||||| | ||| || || Sbjct 3422280 AACAGCAACCTCGTCGGGGGCAGAGTACTCGATAATCTCGGTACAGAGATTGGAGGATTT 3422339 Query 114550 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 114609 || || || | || || ||| || ||||| | ||| ||| |||||||| |||||| | Sbjct 3422340 GATCGTACCGAGGTGCTGTTGGTTCGACTTGGCGTTCGCCGCGTCCTTGTAGAGCATGAA 3422399 Query 114610 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCA 114668 || |||||||| ||||| | || ||||| || ||||| | || | | || Sbjct 3422400 GGGACCACCCGTCTCGGTTTGAGCCTCAAGAATGGCAAACCAGAGCTTCTGGGCCTT--- 3422456 Query 114669 CAGTGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 114722 | ||| || ||| |||| ||| ||||||| |||||| || |||| Sbjct 3422457 -AATGGTCTT---TCGACCCTTGCCAGCCTTCTCGTACGACTCGTAGAGCTGCTCGAACT 3422512 Query 114723 CTTCACCCACGG--CCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 114780 || || | | | || | || || || || | ||||| | ||| | ||| | Sbjct 3422513 --TCTCCGAGTGGACATCGGCAAGACCGGGGCACTCGGCAGGGCACATGAGTGTCCACTC 3422570 Query 114781 ACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATC 114840 || || ||| || ||||||||||||||||| | ||||||||| || ||||||| || Sbjct 3422571 GCCGTCCGACTCGACCCGCTTCATGAAGAGGTCCGAGATCCAGAGGGCGTAGAAGAGGTC 3422630 Query 114841 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 114900 || || | || || | || || || |||| || | || || | ||| || Sbjct 3422631 ACGTGCACGGACCTCCTCCTTACCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAGATGTC 3422690 Query 114901 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG---ACCAGCCTGGTT 114957 |||||||| || || ||||| | || | | ||| ||| ||| |||||| Sbjct 3422691 GGCGTGCCAGGGCTCGAGGTAGATGGCAAACGCGCCCGGACGTTTGTTACCGCCCTGGTC 3422750 Query 114958 TACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 115017 || || | ||| ||||| | || | || ||||| || | |||||| | || | || Sbjct 3422751 GACGTATCGCGCCGTGGCGTCGAACGCTCGGAGCATGGGTACGATACCGTTCGAGTACCC 3422810 Query 115018 ATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACC 115077 || || || ||| ||| ||||| | ||||| |||||||| | || || || Sbjct 3422811 GTTGGTACCGGCAATGTAAGATCCCTTGGCGCGGACATTGTGGATGTGGAGTCCGATCCC 3422870 Query 115078 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGA 115137 ||||| ||| ||||| ||||||||| | |||| | | ||||| || || ||||| Sbjct 3422871 GCCTGCAGTCTTGGAGATCTGCGCGCACGTCTTGAGGGTCTCATAGATACCCTCAATCGA 3422930 Query 115138 GTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 115197 ||| |||| | || | ||||||||| |||||||| || | || ||||| ||||| Sbjct 3422931 GTCGTCCTTCATCGCCACGAGGAAGCAGGATGACATTTGGGGGTTGGGGGTACCGGCGTT 3422990 Query 115198 GAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAA 115257 ||||||||| || | |||||| |||| | | ||||| | ||||||||| | Sbjct 3422991 GAAGAGGGTAGGGGAAGCGTGGGTGAAGTATCGCTCAGACATGAGGTTGTAGGTCTCAAT 3423050 Query 115258 GACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 ||| | ||||| | ||||| ||||||| | ||| ||||||| ||||| ||||| Sbjct 3423051 GACCTTGTCAATGTTGGCACCGTGGATACCGACAGCGACACGCATAATCATGTGCTGGGG 3423110 Score = 161 bits (178), Expect = 1e-34 Identities = 184/246 (75%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || |||||||||||| ||||| |||||||| || || |||||| ||||| Sbjct 11614 GGCAAAGTCGGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTGAGTCC 11555 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | |||||||||||||||||||| Sbjct 11554 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAACCCGAGAAGAAGAT 11495 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || || || || | |||||||||||| || | | ||||| ||| Sbjct 11494 ACCCTCGACGGCGGCAAAGGCGATGAGACGCTCAGCGAATGTG---GACTTGTCGTCCGT 11438 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | |||||| | |||||| | || || |||| ||| || |||| ||||| || || || Sbjct 11437 GATCCACTTGAGCGCCCAGTCGGCTTTCTTCTTGATGCAGGGGATGGTCTCAATGGCGTC 11378 Query 126283 AAAGAG 126288 |||||| Sbjct 11377 AAAGAG 11372 >seq1 Length=3588805 Score = 125 bits (138), Expect = 9e-24 Identities = 201/286 (70%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 8649 AATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAGTCA 8708 ||||| || ||| |||| || | | || || ||||||||| |||||||||||||| Sbjct 59380 AATTATCGCGAAGCCTACGGGATGTACGCTTGTAACGGTATTCTATTCAACCACGAGTCT 59321 Query 8709 CCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAATCG-T 8767 ||||||||||| | | |||||| || |||||| || || || | ||| | Sbjct 59320 CCCCGTCGTGGGCGGACTTTCGTCACGCGCAAGATCTCCCGTGCCGTCGCCGAGATCCAT 59261 Query 8768 CGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGACA 8827 | |||| || | | || | | || ||||| ||||| || | ||||||||||| Sbjct 59260 CTCGGGCTCTCGG-ACTGTATCTACCTTGGTAACCTGGACGCCAAGCGAGACTGGGGACA 59202 Query 8828 CGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACGAATA 8887 ||||| ||||| | || | |||||||| | || ||||| || |||||||| || | Sbjct 59201 TGCCAACGACTACATCGAGGGTATGTGGCTTATGCTGCAACAGGACGAGGCGGATGATTT 59142 Query 8888 TGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933 ||| | ||| |||| ||||| ||| |||| | |||||||||||| Sbjct 59141 TGTTCTGGCGTCGGGCGAGACTCACCCCGTTCGAGAGTTCGTTGAG 59096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353405860080