Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 251 7e-62 >seq2 Length=3428829 Score = 251 bits (278), Expect = 7e-62 Identities = 953/1480 (64%), Gaps = 34/1480 (2%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| ||||| |||||||| || ||||| || || ||||| || || ||||| || Sbjct 3423004 CCCCTACCCTCTTCAACGCCGGTACCCCCAACCCCCAAATGTCATCCTGCTTCCTCGTGG 3422945 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 ||| |||| |||||| || || || | || | ||||||| || ||| |||| Sbjct 3422944 CGATGAAGGACGACTCGATTGAGGGTATCTATGAGACCCTCAAGACGTGCGCGCAGATCT 3422885 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | || || || || ||||| || ||||| | || || |||| ||| || |||| Sbjct 3422884 CCAAGACTGCAGGCGGGATCGGACTCCACATCCACAATGTCCGCGCCAAGGGATCTTACA 3422825 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | ||||||||| || ||| ||||| |||| || |||||||| | ||| || | Sbjct 3422824 TTGCCGGTACCAACGGGTACTCGAACGGTATCGTACCCATGCTCCGAGCGTTCGACGCCA 3422765 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 ||||||| ||||| |||||||| ||| | | ||| | || || |||| |||| Sbjct 3422764 CGGCGCGATACGTCGACCAGGGCGGTAACAAACGTCCGGGCGCGTTTGCCATCTACCTCG 3422705 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 ||||||||||||| ||| | | ||| |||||||||| ||||||||||| || || Sbjct 3422704 AGCCCTGGCACGCCGACATCTTCGAGTTCCTCGACCTGCGCAAGAACCACGGTAAGGAGG 3422645 Query 94256 TGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCG 94315 || | || | |||||||||||||| |||||| | | ||||| || ||||| || | Sbjct 3422644 AGGTCCGTGCACGTGACCTCTTCTACGCCCTCTGGATCTCGGACCTCTTCATGAAGCGGG 3422585 Query 94316 TCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACG 94375 ||||| || || |||| || | || || || || ||||| || |||| | Sbjct 3422584 TCGAGTCGGACGGCGAGTGGACACTCATGTGCCCTGCCGAGTGCCCCGGTCTTGCCGATG 3422525 Query 94376 T--TTGTGGATCGCGTTTTGAAGACTTGTATG-CTCGTTACGAATCGCAGGGCAAGGCCA 94432 | ||| | || || | | || | ||| ||||| | ||||||| Sbjct 3422524 TCCACTCGGA--GAAGTTCGAGCAGCTCTACGAGTCG-TACGAGAAGGCTGGCAAGGGTC 3422468 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | ||| || | || |||||| ||| | || | || | || ||||||| Sbjct 3422467 GAAAGACCATTAAGGCCCAGAAGCTCTGGTTTGCCATTCTTGAGGCTCAAACCGAGACGG 3422408 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 || |||| ||| | | ||||||| | | ||||||||||| ||||| |||||||||| Sbjct 3422407 GTGGTCCCTTCATGCTCTACAAGGACGCGGCGAACGCCAAGTCGAACCAACAGCACCTCG 3422348 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | |||||| ||| ||||| || ||||||||| ||||||| || | || |||||| Sbjct 3422347 GTACGATCAAATCCTCCAATCTCTGTACCGAGATTATCGAGTACTCTGCCCCCGACGAGG 3422288 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA--CAC 94670 ||||||| || ||||| | |||| || ||| || | ||||| ||| ||| | | Sbjct 3422287 TTGCTGTTTGCAACCTTGCCTCCCTCGCCCTCCCCGCATTCGT-CGACATGGAGAAGCGA 3422229 Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT---CTT 94727 ||||| || | || |||| | || | |||| | || | Sbjct 3422228 GTCTA----------TGACTTTAAGAAGCTCCACGAAATCAC--CAAGG-TCGTCACCAA 3422182 Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787 |||||| || ||| ||| |||| |||||| ||| |||||| ||||||| || Sbjct 3422181 GAACCTTGACCAGGTCATCTCGCGCAACTACTACCCTGTCATCGAGGCGCAGAACTCCAA 3422122 Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847 | || || || ||| |||| |||| ||||||||| | || ||||| | || | | Sbjct 3422121 CATGCGTCACCGTCCCGTCGGTCTCGGTGTCCAGGGTCTTGCCGACGCCTTTATGGCGCT 3422062 Query 94848 GCGTCTGCCCTACGACTCTGTCGACG-CGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906 || |||||| ||| || || || | ||| | | || | | || ||||| | || Sbjct 3422061 TCGCATGCCCTTCGAGTCCCCCGCCGCCCGCGAG-CTCAACATCCAGATCTTCGAGACCA 3422003 Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCA-CAC 94965 | || | | ||| | | || | | |||| || | | ||| | || Sbjct 3422002 TCTACCATGCCGCCCTCGAGGCGTCGTGCGAGATGGC----TCAGGAGCTGGGTAAGTAC 3421947 Query 94966 GAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTG 95025 || | | | || || ||| || ||||| | | |||||||| ||||||||| | Sbjct 3421946 GAGACATACGAGGGTTCCCCCATGTCCCAGGGTAAACTCCAGTTCGATCTCTGGGGTCGG 3421887 Query 95026 AAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085 || | | || | |||||| | || || ||| ||| | |||||||| Sbjct 3421886 GTCCCAACCGACCTCTGGGACTGGTCCACCCTCCGAGCTTCCATTAAGCAGCACGGTGTC 3421827 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 |||| | || || || ||||| ||||| || |||||||| | ||||| || ||| Sbjct 3421826 CGAAACTCCCTCCTCGTTGCCCCTATGCCTACCGCCTCCACTTCCCAGATTCTCGGCTGG 3421767 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||||| ||||| |||| ||| |||| | ||| | || ||||| | || || Sbjct 3421766 AACGAGTGCTTCGAGCCCTACACATCCATGCTCTACGCTCGCCGAGTGCTTTCTGGCGAT 3421707 Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGA-CGTCTCTGGGTGTGTGGGGTGA 95264 |||| ||| || | || || || ||||| | | || ||||| | |||| || Sbjct 3421706 TTCCAGGTCGTCTGCCCCTGGCTTCTTCGAGACCTCATCAACT-TGGGTCTCTGGGACGA 3421648 Query 95265 CAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACC 95324 ||| | ||||||| | | ||| ||| || |||| |||||||| || || Sbjct 3421647 CAACATGAAGAACCTCATCATTGCCGCTGGCGGTTCTATCCAAAACATCCCCTCTATCCC 3421588 Query 95325 GGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364 | ||| | ||| | |||||||||| || ||||| ||| Sbjct 3421587 TGCCGACCTGAAGTCAATCTACAAGACTGTCTGGGAAATC 3421548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723039214960