Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 116 6e-21 >seq2 Length=3428829 Score = 116 bits (128), Expect = 6e-21 Identities = 399/616 (65%), Gaps = 12/616 (2%) Strand=Plus/Plus Query 205160 ACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATT 205219 |||| || ||| || ||||| |||||| ||| |||| || || ||||| || | | Sbjct 3422584 ACCCGCTTCATGAAGAGGTCCGAGATCCAGAGGGCGTAGAAGAGGTCACGTGCACGGACC 3422643 Query 205220 CCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGG 205278 | || | || ||||||| || ||| || || || | |||||||||||||| || Sbjct 3422644 TCCTCCTTACCGTGGTTCTTGCGCAGGTCGAGG-AACTCGAAGATGTCGGCGTGCCAGGG 3422702 Query 205279 CTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGT 205338 ||| | | | ||| | ||||| || | ||||| || |||||||| || || | Sbjct 3422703 CTCGAGGTAGATGGCAAACGCGCCCGGACGTTTGTTACCGCCCTGGTCGACGTATCGCGC 3422762 Query 205339 CATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTT 205398 | | |||| ||| |||| ||||| || || | |||||| | | |||||| || | | Sbjct 3422763 CGTGGCGTCGAACGCTCGGAGCATGGGTACGATACCGTTCGAGTACCCGTTGGTACCGGC 3422822 Query 205399 GATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTT 205458 ||| || || | || | || ||| |||| || |||||||| | | ||| Sbjct 3422823 AATGTAAGATCCCTTGGCGCGGACATTGTGGATGTGGAGTCCGATCCCGCCTGCAGTCTT 3422882 Query 205459 GGCGATCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCA 205517 || |||||| |||||| ||||| || || ||||| || | || || |||||| || Sbjct 3422883 GGAGATCTGCGCGCACGTCTTG-AGGGTCTCATAGATACCCTCAATCGAGTCGTCCTTCA 3422941 Query 205518 GTGTCACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGG 205577 | ||| || |||| || | || | || | ||| || |||| |||||| || | Sbjct 3422942 TCGCCACGAGGAAGCAGGATGACATTTGGGGGTTGGGGGTACCGGCGTTGAAGAGGGTAG 3423001 Query 205578 GGCTGGCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTC 205633 || |||||| ||||| | ||||||| ||| |||||||||| | || | Sbjct 3423002 GGGAAGCGTGGGTGAAG----TATCGCTCAGACATGAGGTTGTAGGTCTCAATGACCTTG 3423057 Query 205634 TCCAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCC 205693 || | | | ||||| ||||| | |||| | ||| | | ||| || || | ||| Sbjct 3423058 TCAATGTTGGCACCGTGGATACCGACAGCGACACGCATAATCATGTGCTGGGGACGCTCG 3423117 Query 205694 ATCACCCTCTCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAG 205753 | | | |||| || || || |||| || ||| ||||| || |||| || Sbjct 3423118 ACGATTTTACCGTTGACGCGAAGGAGGTAGGATCGCTCGAGGGTCTTGAACCCAAAGTAG 3423177 Query 205754 TTGAAGGTGTAGTCCC 205769 ||| ||| |||||| Sbjct 3423178 TTGTAGGCAAAGTCCC 3423193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154941574560