Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4 127 5e-24 seq1 95.1 3e-14 >seq4 Length=1954963 Score = 127 bits (140), Expect = 5e-24 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 |||||| || |||||||| |||| ||||||||||| || |||| || || |||||||| Sbjct 837925 GTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTCCGACCGTCCTCCAGCTG 837866 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| |||||||| || |||||||||||||| || ||| || || ||||| ||||| Sbjct 837865 CTTGCCGGCGAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTT 837806 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || |||| |||||| | | ||| || || | ||||||||||| ||||| Sbjct 837805 GGCCTTGACATTGTCGATGGTGTCGGACGATTCGACTTCGAGGGTGATCGTCTTGCCCGT 837746 Query 199606 GAG 199608 || Sbjct 837745 AAG 837743 >seq1 Length=3588805 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || |||||| |||| ||||||||| ||| ||| Sbjct 3579506 CGAAGACGCAACACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAACGTC 3579565 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || || || ||||||||||||||||| ||||| |||||||||||||| || Sbjct 3579566 CTCCCGTCCTCCAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGG 3579615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921207271742