Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 297 2e-75 seq3 91.5 2e-13 >seq2 Length=3428829 Score = 297 bits (328), Expect = 2e-75 Identities = 548/801 (68%), Gaps = 2/801 (0%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | |||||| || ||||| | || ||||| || || |||||||||||||| Sbjct 1822698 TCACCGGTAAGGATGGCAGCCTGGACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 1822639 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | | || | || || || || || | | | || ||||| ||| Sbjct 1822638 ATGGACCTGTTGGGCTCACGGCCAGAGAAGGTGTCGGAGACGAGCTTCTGGATTTTGGGG 1822579 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | |||||||| | || | || |||||||| ||| Sbjct 1822578 ATACGGGTGGAACCACCGACAAGGACGATTTCGTGGACGGAGGCCTTGTCGATCTTGGAG 1822519 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || || ||||| || ||||| ||||| | |||| || || ||| Sbjct 1822518 TCGCGGAGGACCTTCTCGACGGGGTCCATGGTGGATCGGAAGAGGTCCTGGCAGAGCTCC 1822459 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || |||||||| ||||| || ||||| || || |||||| | | || || || Sbjct 1822458 TCGAATCGGGCACGGGTGATGGAGGTGTAGAAGTCGACACCGTCGAAGAGGGAGTCGATC 1822399 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 ||||||| || || || | || || | |||||||| || ||||| || || || || Sbjct 1822398 TCAATGGAGGTCTGGGCGGCGGAGGAGAGGGTTCGCTTGGCACGCTCGCAAGCGGTACGG 1822339 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| |||||||| | ||| ||| | || ||||| | ||||| || ||||| Sbjct 1822338 AGACGACGGAGGGCACGAGCGTTGGAGGACAAGTCCTTCTTGTTCTTACGCTTGAACTCC 1822279 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | | || || || || |||||||||||||| || || || Sbjct 1822278 TGGACGAAGTGGTTGACCAATCGGTTGTCAAAGTCCTCACCACCCAAGTGAGTGTCACCG 1822219 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | |||||| | | || |||||||| || || Sbjct 1822218 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTGAGCAGGGAAACATCGAATGTT 1822159 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 ||||| || || || || ||||| || ||| | ||| | || ||||| ||||||||| Sbjct 1822158 CCACCTCCGAGATCGAAGATGAGGACATTCTTCTCGCCCTCGGACTTCTTGTCGAGACCG 1822099 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAAT 7668 || || || || ||||| || || || || || |||| || |||| | || || || || Sbjct 1822098 TAGGCAATGGCGGCCGCGGTGGGCTCGTTGATGATACGGAGGACA-TCAAGACCGGCGAT 1822040 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | | || || || || || || || || || ||||| |||||||| ||||| || || Sbjct 1822039 AAGACCGGCGTCCTTGGTGGCCTGACGCTGGGAGTCGTTGAAGTAGGCAGGGACGGTGAC 1821980 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 ||| || | ||||| ||| || || | || ||| | || ||||| || | || Sbjct 1821979 GACGGCCTTGGTGACGACACCACCAAGGTAGGCCTCGGCGGTCTCCTTCATCTTAATGAG 1821920 Query 7789 AACCATCGATGAAATCTCTTC 7809 |||||| || || || || || Sbjct 1821919 AACCATGGAGGAGATTTCCTC 1821899 >seq3 Length=2003673 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 |||||||| || || ||||| || || || || ||||| || || | || || || Sbjct 833742 GAAACATCGAAAGTTCCACCTCCGAGATCGAAGATGAGGACAGTCTTGGACTCCTCGTTC 833683 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 |||| ||||||||||| ||||| || || || || || || || || || || ||| Sbjct 833682 TTCTCGTCGAGACCGTAGGCGATGGCGGCAGCGGTGGGCTCGTTGATGATTCGGAGAACC 833623 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 | |||||||| || | | ||||| || || || | || || || ||||| |||||| Sbjct 833622 TCGAGGCCAGCGATGGCACCAGCATCCTTGGTAGCAAGACGCTGAGAGTCGTTGAAGTAG 833563 Query 7715 GCCGGGAC 7722 || ||||| Sbjct 833562 GCGGGGAC 833555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132593581840