Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 6e-11 >seq1 Length=3588805 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/227 (68%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||||||||| | || ||||||||||| || | || ||| | | Sbjct 3580003 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAG 3579944 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | | ||||| ||||| || || || || | ||| || || Sbjct 3579943 CGACACCATCGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCA 3579884 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| || | || | ||| || |||||||| || || | | || || | |||||||| Sbjct 3579883 ACAGCGATTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGCTGTCCGACTACAA 3579824 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGG 107781 || || |||||||| || ||||| | || ||| |||| |||||| Sbjct 3579823 TATCCAGAAGGAGTCAACACTGCACCTCGTCTTGCGATT--GAGGGG 3579779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876673605914