Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=3588805 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| ||||| || | || | ||||||| || || || ||||||||| || || || Sbjct 3579784 CAATCGCAAGACGAGGTGCAGTGTTGACTCCTTCTGGATATTGTAGTCGGACAGCGTGCG 3579843 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||||||||||||||| |||| | |||| | |||||||| ||||| || || || || Sbjct 3579844 GCCATCTTCGAGCTGTTTGCCGGCAAAGATCAATCGCTGTTGGTCTGGGGGGATACCCTC 3579903 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || || | | || | || ||| ||| ||| || || | || Sbjct 3579904 CTTGTCCTGGATCTTCGCCTTTACATTGTCGATGGTGTCGCTCGACTCAACCTCAAGAGT 3579963 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | ||||| ||||| || ||||| | || |||||||| Sbjct 3579964 GATGGTTTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 3580002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611045101360