Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 197 2e-44 >seq2 Length=3428829 Score = 197 bits (218), Expect = 2e-44 Identities = 207/265 (78%), Gaps = 9/265 (3%) Strand=Plus/Plus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 ||||||||||||||||| |||||||| ||||| |||||||||||| |||||||||| | | Sbjct 11300 GAAAACATCCACTCTGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGACCCCG-C 11358 Query 1456075 GAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGA 1456133 | ||||| |||||||| |||||| || || | || | | | ||| || ||||| Sbjct 11359 ACGCCGGACCTACCTCTTTGACGCCATTGAGACCATCCCCTGCATCAAGAAGAAAGCCGA 11418 Query 1456134 CTGGGCGATGAAGTGGATCAACAAGGAGGGC--CTCGACACTTTGCCGAGCGGCTCGTCG 1456191 ||||||| | |||||||| || ||| | | || ||| || || ||||| ||| ||| Sbjct 11419 CTGGGCGCTCAAGTGGAT---CACGGACGACAAGTCCACA-TTCGCTGAGCGTCTCATCG 11474 Query 1456192 GCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCA 1456250 |||||||| ||||||||| ||||| |||||||| ||| | ||||||| ||||||| Sbjct 11475 CCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGTTCATTCGCCTCCATCTTCTGGCTCA 11534 Query 1456251 AGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||| || ||||||||||| || Sbjct 11535 AGAAGCGTGGTCTCATGCCCGGACT 11559 Score = 194 bits (214), Expect = 2e-43 Identities = 346/505 (69%), Gaps = 19/505 (4%) Strand=Plus/Minus Query 259683 ACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTTG 259742 ||||||| ||||||||| |||||||| | || ||| ||||||| |||| ||||||| Sbjct 3423229 ACAAGGACGTCCTCGACTCTGCCATCATCTACAACCGGGACTTTGCCTACAACTACTTTG 3423170 Query 259743 GTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCGGC 259802 | | |||| | || |||||||| || || || |||||||||| | Sbjct 3423169 GGTTCAAGACCCTCGAGCGATCCTACCTCCTTCGCGTCAACGGTAAAATCGTCGAGCGTC 3423110 Query 259803 CCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAATG 259862 ||||| | ||| | ||||||||||| | || | || |||| || | ||||| | Sbjct 3423109 CCCAGCACATGATTATGCGTGTCGCTGTCGGTATCCACGG---TGCCAACATTGACAAGG 3423053 Query 259863 CGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGA 259922 | ||| |||||| | |||||| ||| | |||||| || Sbjct 3423052 TCATTGAG------------ACCTACAACCTCATGTCTGAGCGATACTTCACCCACGCTT 3423005 Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGG 259982 | || || ||||| || ||||| || || ||| || | || || ||||| || ||| Sbjct 3423004 CCCCTACCCTCTTCAACGCCGGTACCCCCAACCCCCAAATGTCATCCTGCTTCCTCGTGG 3422945 Query 259983 ACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCT 260042 ||||||| ||| ||||| ||||| |||||||| || |||||| |||||||| |||| Sbjct 3422944 CGATGAAGGACGACTCGATTGAGGGTATCTATGAGACCCTCAAGACGTGCGCGCAGATCT 3422885 Query 260043 CCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA--CACAAGGTGCGCGCCGCGGGCGCCTA 260100 ||||| | || ||||| ||||| | || || ||||| || |||||| ||| | || Sbjct 3422884 CCAAGACTGCAGGCGGGATCGGACT--CCACATCCACAATGTCCGCGCCAAGGGATCTTA 3422827 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | | || || |||||||| | || ||||| | || |||||||| || | || ||| Sbjct 3422826 CATTGCCGGTACCAACGGGTACTCGAACGGTATCGTACCCATGCTCCGAGCGTTCGACGC 3422767 Query 260161 CACGGCGCGCTACGTCGACCAGTGC 260185 ||||||||| |||||||||||| || Sbjct 3422766 CACGGCGCGATACGTCGACCAGGGC 3422742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177808692252212