Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01]
26 sequences; 20,595,339 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2 288 1e-72
seq5 109 6e-19
seq3 96.9 4e-15
>seq2
Length=3428829
Score = 288 bits (318), Expect = 1e-72
Identities = 411/570 (72%), Gaps = 14/570 (2%)
Strand=Plus/Minus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTACGA 53253
||||| ||||| | ||||||||||||| | || | || | ||| |||||| ||| |
Sbjct 3423095 ATGCGTGTCGCTGTCGGTATCCACGGTGCCAACATTGACAAG-GTCATTGAGACCTACAA 3423037
Query 53254 CTTAATG----AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309
| | ||| ||| | ||||| || ||||| | || ||||| |||||||| ||||
Sbjct 3423036 CCTCATGTCTGAGCGA----TACTTCACCCACGCTTCCCCTACCCTCTTCAACGCCGGTA 3422981
Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369
| |||| || ||||| ||||||||| |||||||||||||| |||||||| || |
Sbjct 3422980 CCCCCAACCCCCAAATGTCATCCTGCTTCCTCGTGGCGATGAAGGACGACTCGATTGAGG 3422921
Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429
| ||||| ||||| |||||| ||| || || ||||||||| | || || |||||
Sbjct 3422920 GTATCTATGAGACCCTCAAGACGTGCGCGCAGATCTCCAAGACTGCAGGCGGGATCGGAC 3422861
Query 53430 TCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489
||||| | || ||||| || || || | || || || ||||| | |
Sbjct 3422860 TCCACATCCACAATGTCCGCGCCAAGGGATCTTACATTGCCGGTACCAACGGGTACTCGA 3422801
Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549
| || ||||| || |||||||| | ||| || |||||| || |||||| ||||||| |
Sbjct 3422800 ACGGTATCGTACCCATGCTCCGAGCGTTCGACGCCACGGCGCGATACGTCGACCAGGGCG 3422741
Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609
|| || || ||| |||| ||||||||||||||||| |||||||||||||| | |
Sbjct 3422740 GTAACAAACGTCCGGGCGCGTTTGCCATCTACCTCGAGCCCTGGCACGCCGACATCTTCG 3422681
Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT- 53667
|||| ||||| ||||| ||| || ||| | || ||| | || ||| |||||||| ||
Sbjct 3422680 AGTTCCTCGACCTGCGCAAGAACCACGGTAAGGAGGAGGTCCG-TGCACGTGACCTCTTC 3422622
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727
||| || || ||||| |||||||||||||| | ||| ||| ||||| ||||||
Sbjct 3422621 TAC-GCCCTCTGGATCTCGGACCTCTTCATGAAGCGGGTCGAGTCGGACGGCGAGTGGAC 3422563
Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCT 53757
|| |||||||| |||||||||||| ||
Sbjct 3422562 ACTCATGTGCCCTGCCGAGTGCCCCGGTCT 3422533
Score = 93.3 bits (102), Expect = 5e-14
Identities = 328/504 (65%), Gaps = 15/504 (3%)
Strand=Plus/Minus
Query 55096 TGACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCAT 55155
||||||| | ||||| |||||| | || || || || |||||| ||| ||||||
Sbjct 3422223 TGACTTTAAGAAGCTCCACGAAATCACCAAGGTCGTCACCAAGAACCTTGACCAGGTCAT 3422164
Query 55156 CGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCAT 55215
| || |||||||| | ||||| || |||||| | || ||||| ||| |
Sbjct 3422163 CTCGCGCAACTACTACCCTGTCATCGAGGCGCAGAACTCCAACATGCGTCACCGTCCCGT 3422104
Query 55216 CGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTC 55275
|| ||||||| ||||| | |||||| ||| ||| ||| | |||||||||| ||
Sbjct 3422103 CGGTCTCGGTGTCCAGGGTCTTGCCGACGCCTTTATGGCGCTTCGCATGCCCTTCGAGTC 3422044
Query 55276 GGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCG 55334
| || || || | ||| | |||||| || | ||||||| ||| || ||||
Sbjct 3422043 CCCCGCCGCCCGCGAGCTCAACATCCAGATCTTCGAGAC-CATCTACCATGCCGCCCTCG 3421985
Query 55335 AGGAGTCGTGTCATCTGGCT-ATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCA 55393
||| |||||| | ||||| | |||| ||| | |||||||| | | | ||| ||
Sbjct 3421984 AGGCGTCGTGCGAGATGGCTCAGGAGCT-GGGTAAGTACGAGACATACGAGGGTTCCCCC 3421926
Query 55394 GCTGACAAGGGACTTCTCCAGTTCGATCTATGGGG-CAAGTCTGACCC--CATGTTTGAC 55450
| |||| |||||||||||||| ||||| | ||| | || | | | |||
Sbjct 3421925 ATGTCCCAGGGTAAACTCCAGTTCGATCTCTGGGGTCGGGTCCCAACCGACCTCTGGGAC 3421866
Query 55451 AAGTTGA-------AGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGC 55503
|| | ||| | |||| | | || | || |||||||| ||||| ||
Sbjct 3421865 TGGTCCACCCTCCGAGC-TTCCATTAAGCAGCACGGTGTCCGAAACTCCCTCCTCGTTGC 3421807
Query 55504 GCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTA 55563
|| ||||| ||||| || || | ||||| | ||| |||||| |||||||| ||
Sbjct 3421806 CCCTATGCCTACCGCCTCCACTTCCCAGATTCTCGGCTGGAACGAGTGCTTCGAGCCCTA 3421747
Query 55564 CACGACCAACATCTACCTGCGCCG 55587
||| ||| ||||| |||||
Sbjct 3421746 CACATCCATGCTCTACGCTCGCCG 3421723
>seq5
Length=1923346
Score = 109 bits (120), Expect = 6e-19
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 74763 TGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCA 74822
|||| || ||||||| ||| || | || ||||| || | | || ||||| || |||
Sbjct 661440 TGCGTTCCCTCATCTCGGCTGATAAGCTCGTTCGAGAATGTCAATCCGGGCATCAGACCA 661499
Query 74823 CGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACAC 74882
|| ||||| ||||| |||||||| ||| || || |||||||||||||||||||||
Sbjct 661500 CGTTTCTTTAACCAGAAGATGGCGGCGAAAGATCCCGAAAAGAAGATGCCTTCGACACAC 661559
Query 74883 GCAAAGGCGACAAGGCGT 74900
||||| ||||||||||||
Sbjct 661560 GCAAAAGCGACAAGGCGT 661577
>seq3
Length=2003673
Score = 96.9 bits (106), Expect = 4e-15
Identities = 170/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 117344 GCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACA 117403
|||||||| ||||||||||| ||| | || | ||||| | ||||||| || ||
Sbjct 810367 GCAAGACGGGTACCGAATTGACCATTAGGAGAAAGCAGGTTGATGTTGTTGCTTCCGACG 810426
Query 117404 AAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCC 117463
||||||| || | |||||| || |||| || || ||||| ||||||
Sbjct 810427 TAGTTTTGCGCAAGACCGACAATAGTGGTGGTGAGGGAGATTTCGCCGTGGTGGTACGCC 810486
Query 117464 GTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTC 117523
|||| |||| |||||||| ||||||| || ||||| || || | ||||||
Sbjct 810487 GTCTTTTCCGAAACGTAGCCGACCAGCTGCGCAACCTTGATCTCCTTCTGCAGGTTTCGT 810546
Query 117524 TTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGG 117583
|||| || | |||| ||| || ||||| | || || ||||| |||||||| ||||
Sbjct 810547 TTGAAACAACCGTAAAGCACTTTACGCTGGCCGGGTTTGAGACCGTCCGCCACCGAAGGG 810606
Query 117584 ATCGAACG 117591
|| || ||
Sbjct 810607 ATTGATCG 810614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215822154800
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