Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 >seq1 Length=3588805 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || ||||| | || |||||||| || || || | Sbjct 3580002 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAGC 3579943 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || || || || || || ||| Sbjct 3579942 GACACCATCGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAA 3579883 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||||||||| | ||||| | || | ||||| ||||| Sbjct 3579882 CAGCGATTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGCTGTCCGACTACAAT 3579823 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || | || ||||| ||| ||||||| || Sbjct 3579822 ATCCAGAAGGAGTCAACACTGCACCTCGTCTTGCGATTGAGGGGTGGTAT 3579773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918258651520