Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 >seq1 Length=3588805 Score = 120 bits (132), Expect = 2e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || ||||||||||| || ||||| |||||||| || ||||| || | Sbjct 3580003 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAG 3579944 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | |||| || || ||||| || ||| | || ||||| || Sbjct 3579943 CGACACCATCGACAATGTAAAGGCGAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCA 3579884 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| || || |||||||||||||| || ||||| | ||||| | ||| ||||| Sbjct 3579883 ACAGCGATTGATCTTTGCCGGCAAACAGCTCGAAGATGGCCGCACGCTGTCCGACTACAA 3579824 Query 23790 CATACAAAAAGAGTCCACA 23808 || || || ||||| ||| Sbjct 3579823 TATCCAGAAGGAGTCAACA 3579805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009492893208