Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=3428829 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/209 (69%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 4584 ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATA 4643 || || ||||| || || || | ||||||||| | ||| | ||| || ||||| || || Sbjct 11580 ATGAGCTCGTTGGAGAAGGTGAGTCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATG 11521 Query 4644 GCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGAC 4703 | ||| ||||| || || ||||| || || || ||||||||||| || | | || Sbjct 11520 GAGGCGAATGAACCCGAGAAGAAGATACCCTCGACGGCGGCAAAGGCGATGAGACGCTCA 11461 Query 4704 CCGAACGAGCTGGCTTTGTCTT---TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTA 4760 |||| | ||| ||||| | | ||||| || | ||||||| ||||| ||||| Sbjct 11460 GCGAATG---TGGACTTGTCGTCCGTGATCCACTTGAGCGCCCAGTCGGCTTTCTTCTTG 11404 Query 4761 ACGCACGGAATTGTGTATATAGCGTTAAA 4789 | ||| || || || | || |||| ||| Sbjct 11403 ATGCAGGGGATGGTCTCAATGGCGTCAAA 11375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049464678658