Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq29 114 1e-20 >seq29 Length=171343 Score = 114 bits (126), Expect = 1e-20 Identities = 292/442 (66%), Gaps = 8/442 (2%) Strand=Plus/Plus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 ||||| || | || ||| || || || || || || | || ||||| ||| || ||| Sbjct 54108 CCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTTC 54167 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || |||||||| || ||||| ||||| || ||||| || | || || Sbjct 54168 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAT 54227 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 || | |||| || | | || | |||| ||||| || |||| || Sbjct 54228 GCTACCAATCTCTCACCAAAGCACGACTGCTTGTCTGAGATCCAAGTCATTGCCCATTCA 54287 Query 17165 GCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTC-CTG 17223 || || |||| ||| | |||||| || ||||| || |||| | | ||| ||| Sbjct 54288 GCCTTGCGCTTGATGGCAGGCATCGTCTCGATGGCATTGAATAGA----CGTGTTCGCTG 54343 Query 17224 TAGG---TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTC 17280 | | ||| || || ||||||||||| ||| ||| | ||| | ||| ||||| || Sbjct 54344 TGCGGTTTCGCGGATGTAGGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTC 54403 Query 17281 CATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAA 17340 || ||||| || ||||| ||||| | ||| || || | ||| ||||| | ||| Sbjct 54404 AATCATGATCTGGAAGCCGTAGAAGCACCTGGCCTCTGCGACTTGGACTTCGCTGCTGAA 54463 Query 17341 TCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATG 17400 |||||| || || ||||| ||||| |||||| | |||||| || || | || || Sbjct 54464 TCGTTCTAGGAGGTTCTCGTTGACGATACCGTCGGCAGAGGCGAAGAATGCGAGTACGTG 54523 Query 17401 CTTAATGAAATATTTTTCGTCC 17422 ||||| || ||||||| Sbjct 54524 AGAGATGAAGTAGCGTTCGTCC 54545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544603724720