Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq12 98.7 7e-16 seq1 93.3 3e-14 >seq12 Length=1303331 Score = 98.7 bits (108), Expect = 7e-16 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985 ||||||||||| ||| | ||||| |||||||| ||||| || || | || | Sbjct 145615 ATTCCAAGCACTCATGATTATCCTCCTATCTGTGGGGTTCTCCTTGATCTTTCTGATGCA 145556 Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAA-CACCTTTATATTCTG 102044 || || ||||| || || |||| |||| |||||| ||| || | ||||||| | Sbjct 145555 CTCCTTCAATTGATCGACACCTTGCCCTTCATAATC-CGCTTTGGCATCCTTATATTTCG 145497 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 | || || |||||||| || || |||||||| ||||||||||| ||||| || || || | Sbjct 145496 CGCCAAAGTGCCTCCATTGGAAACCATACACCGGTCCAAGATCACCTTCTTCCCTATCTT 145437 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACG 102160 | ||| | || || || || | || ||||| ||||||| || || ||| Sbjct 145436 TGAGACCTATCTTGTCCAAGTATTCGCGCGAACCATTGCCATCCCAGATATGGACG 145381 >seq1 Length=6229779 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| ||| | || || ||||| |||||||| || || | || | Sbjct 3952520 TTCCAAGCACTCATGATGATTCTCCTATCCGTAGGGTTCTCCTTGATCTTCCTTATACAT 3952461 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 | || || || || || |||| |||| ||| | || | ||||||| ||| Sbjct 3952460 TCCTTCAACTGATCCACACCTTGACCTTCGTAACTACTTTTTGCATCCTTATATTTCGCT 3952401 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106 || ||||||||||| || || |||||||| ||||||||||| ||||| ||||| || Sbjct 3952400 CCAAAATGCCTCCATTGGAAACCATACACCGGTCCAAGATCACCTTCTTCTCTATCTGTC 3952341 Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACG 102160 | ||| | ||||| ||| || | || |||||| ||||||| || || ||| Sbjct 3952340 AGACCTATCTTATCCAAATATTCGCGTGAGCCATTCCCATCCCAGATATGGACG 3952287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250521976654