Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq35 257 2e-63 seq23 257 2e-63 seq29 253 2e-62 seq12 87.8 2e-12 seq1 86.0 6e-12 seq7 84.2 2e-11 seq17 82.4 8e-11 >seq35 Length=121122 Score = 257 bits (284), Expect = 2e-63 Identities = 377/526 (72%), Gaps = 8/526 (2%) Strand=Plus/Minus Query 116649 ACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGA-CACG 116707 ||| |||| | ||||| || |||||||||| |||||| | ||||| || ||||| | | Sbjct 14293 ACAGAAAG-CAGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCC 14235 Query 116708 AGCGACTGGGAGCGCTTGAACGACAA---CGAGCGCCATTTCATCAAGCACGTGCTGGCC 116764 | |||||||||| | | | |||| ||| || |||||| ||||| || || Sbjct 14234 A-CGACTGGGAGAACAAGCTCAACAAGGACGAACGTTTCTTCATCTCTCACGTACTCGCA 14176 Query 116765 TTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAG-GA 116823 || ||||| || ||| || |||||||||||||| || | ||||| ||| ||| || Sbjct 14175 TTCTTCGCTTCCGCCGATGGTATCGTCAACGAGAACCTCCTAGAGCGATTCAG-CAGCGA 14117 Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCA 116883 || ||||| |||||||| |||||||||||||||| |||||| || || ||| | || Sbjct 14116 AGTCCAGGTCGCCGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCA 14057 Query 116884 CTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCG 116943 | | ||| | || || ||||||||| || ||| | ||| | | ||| | || Sbjct 14056 CGCAGAAGTCTACTCCCTCCTCATCGATACATACATCCGCGAAACTGCCCAGAGGACACG 13997 Query 116944 TTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCG 117003 | | || || ||||||||||||||||| | |||| ||||| || ||||| || Sbjct 13996 TCTTTTCAATGCCATCGAGACGATGCCAGCCATCAAGCGCAAGGCTGAATGGGCAATGAC 13937 Query 117004 CTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063 |||||| | | || || | ||| || || || |||| || ||||| || || || Sbjct 13936 ATGGATCTCAGACAAGCAGTCGTGCTTTGGTGAACGATTGGTAGCGTTCGCCGCTGTAGA 13877 Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123 |||| ||||||| || || |||||||||||| || ||||||||||| || || ||||| Sbjct 13876 GGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGACTCAT 13817 Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 ||| || || || ||| |||||||||||||| | | || |||||| Sbjct 13816 GCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGTGATGAGGGT 13771 >seq23 Length=274361 Score = 257 bits (284), Expect = 2e-63 Identities = 377/526 (72%), Gaps = 8/526 (2%) Strand=Plus/Minus Query 116649 ACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGA-CACG 116707 ||| |||| | ||||| || |||||||||| |||||| | ||||| || ||||| | | Sbjct 224124 ACAGAAAG-CAGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCC 224066 Query 116708 AGCGACTGGGAGCGCTTGAACGACAA---CGAGCGCCATTTCATCAAGCACGTGCTGGCC 116764 | |||||||||| | | | |||| ||| || |||||| ||||| || || Sbjct 224065 A-CGACTGGGAGAACAAGCTCAACAAGGACGAACGTTTCTTCATCTCTCACGTACTCGCA 224007 Query 116765 TTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAG-GA 116823 || ||||| || ||| || |||||||||||||| || | ||||| ||| ||| || Sbjct 224006 TTCTTCGCTTCCGCCGATGGTATCGTCAACGAGAACCTCCTAGAGCGATTCAG-CAGCGA 223948 Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCA 116883 || ||||| |||||||| |||||||||||||||| |||||| || || ||| | || Sbjct 223947 AGTCCAGGTCGCCGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCA 223888 Query 116884 CTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCG 116943 | | ||| | || || ||||||||| || ||| | ||| | | ||| | || Sbjct 223887 CGCAGAAGTCTACTCCCTCCTCATCGATACATACATCCGCGAAACTGCCCAGAGGACACG 223828 Query 116944 TTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCG 117003 | | || || ||||||||||||||||| | |||| ||||| || ||||| || Sbjct 223827 TCTTTTCAATGCCATCGAGACGATGCCAGCCATCAAGCGCAAGGCTGAATGGGCAATGAC 223768 Query 117004 CTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063 |||||| | | || || | ||| || || || |||| || ||||| || || || Sbjct 223767 ATGGATCTCAGACAAGCAGTCGTGCTTTGGTGAACGATTGGTAGCGTTCGCCGCTGTAGA 223708 Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123 |||| ||||||| || || |||||||||||| || ||||||||||| || || ||||| Sbjct 223707 GGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGACTCAT 223648 Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 ||| || || || ||| |||||||||||||| | | || |||||| Sbjct 223647 GCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGTGATGAGGGT 223602 >seq29 Length=171343 Score = 253 bits (280), Expect = 2e-62 Identities = 370/520 (71%), Gaps = 5/520 (1%) Strand=Plus/Minus Query 116654 AAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGAC 116713 || || |||||||| |||||||||| |||||| | ||||| || |||||| | |||| Sbjct 54625 AAAGCAGAGGCGTCCTTCTGGACCGCAGAGGAGATTGACCTCTCAAAGGACCTGCACGAC 54566 Query 116714 TGGGAGCGCTTGAACGACAA---CGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTC 116770 |||||| | | | |||| ||| ||| | |||||| ||||| || || || ||| Sbjct 54565 TGGGAGAACAAGCTCAACAAGGACGAACGCTACTTCATCTCTCACGTACTCGCATTCTTC 54506 Query 116771 GCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAG-GAGGTGCA 116829 ||| | |||||| |||||||||||||| || | || || ||| ||| || || || Sbjct 54505 GCCTCTGCCGACGGTATCGTCAACGAGAACCTCCTAGAACGATTCAG-CAGCGAAGTCCA 54447 Query 116830 GGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGA 116889 || || ||||| |||||||||||||||| |||||| || || ||| | ||| | || Sbjct 54446 AGTCGCAGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCACGCAGA 54387 Query 116890 AATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTT 116949 | | || || ||||||||| || ||| | ||| | | || ||| | || Sbjct 54386 AGTCTACTCCCTCCTCATCGATACCTACATCCGCGAAACCGCACAGCGAACACGTCTATT 54327 Query 116950 GAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGAT 117009 || ||||||||||||||||| | |||| ||||| || ||||| || ||||| Sbjct 54326 CAATGCCATCGAGACGATGCCTGCCATCAAGCGCAAGGCTGAATGGGCAATGACTTGGAT 54267 Query 117010 CGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGT 117069 | | | || || | ||| || ||| | |||| || ||||| || || |||||| | Sbjct 54266 CTCAGACAAGCAGTCGTGCTTTGGTGAGAGATTGGTAGCATTCGCCGCTGTAGAGGGCAT 54207 Query 117070 CTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGG 117129 |||||| || || |||||||||||| || ||||||||||| || || |||||||| || Sbjct 54206 CTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGACTCATGCCTGG 54147 Query 117130 CCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || ||| ||| |||||||||| | | || |||||| Sbjct 54146 TCTTACCTTCTCCAATGAGCTCATCTGCCGTGATGAGGGT 54107 >seq12 Length=1303331 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || || || ||||| || | || ||||| | || Sbjct 512293 ATGCAAATCTTTGTCAAGACATTGACAGGAAAGACCATTACTTTGGAAGTCGAGTCGTCC 512352 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | ||||| || || | || || || || ||||| | || || Sbjct 512353 GATACGATTGATGCTGTCAAGAGCAAGATCCAAGATAAGGAAGGTATCCCACCTGATCAA 512412 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| ||||| ||||||||||| || | || ||||| |||||||| Sbjct 512413 CAGAGACTCATCTTTGCGGGTAAACAGCTGGAAGATGGACGAACCCTTTCAGACTACAAT 512472 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| ||||||||| Sbjct 512473 ATCCAGAAGGAGAGCACGCTGCA 512495 Score = 86.0 bits (94), Expect = 6e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| ||||| ||||||| ||| ||||||||||| || |||| || ||||||| |||||| Sbjct 511897 CCAACAACGTCTCATCTTCGCCGGCAAACAGCTCGAGGACGGCCGAACCCTCAGCGACTA 511956 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892 ||| || ||||||||| | || |||| Sbjct 511957 CAATATTCAGAAGGAGTCTACCTTGCA 511983 >seq1 Length=6229779 Score = 86.0 bits (94), Expect = 6e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| ||||||||||||| ||| ||||||||||| || |||| || ||||||| |||||| Sbjct 4306810 CCAACAACGACTCATCTTCGCCGGCAAACAGCTCGAGGACGGCCGAACCCTCAGCGACTA 4306869 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892 || || ||||||||| | || |||| Sbjct 4306870 TAATATTCAGAAGGAGTCTACCTTGCA 4306896 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 ||||||| | || || || || ||||||| ||| ||||| ||||| || || | || | Sbjct 3066949 GCATCCCGCCCGATCAACAGCGTCTCATCTTCGCAGGCAAGCAGCTCGAGGATGGACGAA 3067008 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| ||||||||||||||||||||| | || |||||| Sbjct 3067009 CCCTCTCCGACTACAACATCCAGAAGGAATCTACCCTGCAT 3067049 >seq7 Length=1728130 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 ||||||| | || || || || ||||||| ||| ||||| ||||| || || | || | Sbjct 1697714 GCATCCCGCCCGATCAACAGCGTCTCATCTTCGCAGGCAAGCAGCTCGAGGATGGACGGA 1697655 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| ||||||||||||||||||||| | || |||||| Sbjct 1697654 CCCTCTCAGACTACAACATCCAGAAGGAGTCGACCCTGCAT 1697614 >seq17 Length=645479 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 ||||| | ||||| || || ||||||| ||| || |||||||| || || | || ||| Sbjct 176750 ATCCCTCCCGACCAACAGCGTCTCATCTTCGCTGGTAAACAGCTCGAGGATGGACGAACC 176691 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||| |||||||||||||||||||||| | || |||| Sbjct 176690 CTCTCCGACTACAACATCCAGAAGGAGTCTACCTTGCA 176653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218208203040