Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 seq12 102 6e-17 >seq1 Length=6229779 Score = 107 bits (118), Expect = 1e-18 Identities = 166/236 (70%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 |||||||||| ||| | ||||| ||||| || ||||| | || | || |||| Sbjct 3952520 TTCCAAGCACTCATGATGATTCTCCTATCCGTAGGGTTCTCCT---TGATCTTCCTTATA 3952464 Query 97351 ---TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCT 97407 | ||| || ||||| || |||| || | ||| | || | | | ||||| Sbjct 3952463 CATTCCTTCAACTGATCCACACCTTGACCTTCGTAACTACTTTTTGCATCCTTATATTTC 3952404 Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCA 97467 ||||||||||||||||||||||| ||||| || |||||||| || |||||||||||||| Sbjct 3952403 GCTCCAAAATGCCTCCATTGGAAACCATACACCGGTCCAAGATCACCTTCTTCTCTATCT 3952344 Query 97468 CAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCAC 97523 | ||| | |||||| ||||| | || ||||| ||||||| || || || Sbjct 3952343 GTCAGACCTATCTTATCCAAATATTCGCGTGAGCCATTCCCATCCCAGATATGGAC 3952288 >seq12 Length=1303331 Score = 102 bits (112), Expect = 6e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349 ||||||||||| ||| | || || ||||| || ||||| | || | | || Sbjct 145615 ATTCCAAGCACTCATGATTATCCTCCTATCTGTGGGGTTCTCCTTGATCTTTCTGATGCA 145556 Query 97350 CTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAG-ACCTTGATATTCTG 97408 || ||| |||||||| || |||| || |||||| |||| | | | | ||||| | Sbjct 145555 CTCCTTCAATTGATCGACACCTTGCCCTTCATAATCC-GCTTTGGCATCCTTATATTTCG 145497 Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468 | ||||| |||||||||||||| ||||| || |||||||| || |||||||| ||||| Sbjct 145496 CGCCAAAGTGCCTCCATTGGAAACCATACACCGGTCCAAGATCACCTTCTTCCCTATCTT 145437 Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCAC 97523 || ||| | ||| || || || | || ||||| ||||||| || || || Sbjct 145436 TGAGACCTATCTTGTCCAAGTATTCGCGCGAACCATTGCCATCCCAGATATGGAC 145382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783349129780