Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq17 93.3 4e-14 seq5 86.0 5e-12 >seq17 Length=645479 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | |||||||| || || |||||||| ||| | || || ||||||| Sbjct 176647 ACCAAGTGCAAGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCATCCTCG 176706 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 |||||||| |||||| ||||||||||||| || |||||||| || Sbjct 176707 AGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGAT 176750 >seq5 Length=2077020 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | |||||||| || || || ||||| || || || || |||||| Sbjct 1583319 CACCAAGTGCAAGGTAGACTCCTTCTGGATATTGTAGTCTGACAAGGTTCGTCCATCCTC 1583260 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||||||| |||||| ||||||||||||| || ||||| || || Sbjct 1583259 GAGCTGTTTGCCAGCGAAGATGAGACGCTGTTGGTCGGGTGGGAT 1583215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829585754568