Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq35 104 2e-17 seq23 104 2e-17 >seq35 Length=121122 Score = 104 bits (114), Expect = 2e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 16276 CTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGC 16335 |||||| || ||||||||||| ||||| ||||| || || || | ||| || || ||||| Sbjct 13792 CTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGCGGC 13851 Query 16336 AAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACC 16392 || |||||||| ||||| || || || || ||||| || || |||||||| ||||| Sbjct 13852 GAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAACGCTACCAATCGTTCACC 13908 >seq23 Length=274361 Score = 104 bits (114), Expect = 2e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 16276 CTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGC 16335 |||||| || ||||||||||| ||||| ||||| || || || | ||| || || ||||| Sbjct 223623 CTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGCGGC 223682 Query 16336 AAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACC 16392 || |||||||| ||||| || || || || ||||| || || |||||||| ||||| Sbjct 223683 GAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAACGCTACCAATCGTTCACC 223739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511109664400