Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 170 2e-37 seq11 165 7e-36 seq29 113 4e-20 seq35 102 7e-17 seq23 102 7e-17 >seq1 Length=6229779 Score = 170 bits (188), Expect = 2e-37 Identities = 172/224 (77%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 || || |||||||| || | ||| || ||||| ||||||||||| || ||||| || || Sbjct 991563 TCTACTCGTCTCATGAACATATCGGGAATCCAGAGAGCGTAGAAAAGATCGCGTGCTCGG 991504 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || || ||||| ||| |||||| ||| || | || || || || ||||||||||| Sbjct 991503 ACTTCTTCTTTACCGTGGTTCTTGCGCAAGTCGAGGAACTCGAAGACATCCGCATGCCAT 991444 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| | ||| | |||||| || || |||| ||| ||||| || ||||||||||| || Sbjct 991443 GGCTCAATGTAGATGGCAAAGGCTCCAGGTCGCTTGTTGCCTCCTTGATCGACGTATCGA 991384 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || ||||||||||| |||| ||||| || || | |||||| || Sbjct 991383 GCGGTGTTGTTGTAGACTCGGAGCATAGGTACAATACCGTTCGA 991340 >seq11 Length=1302298 Score = 165 bits (182), Expect = 7e-36 Identities = 171/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 || || |||||||| || | || || ||||| ||||||||||| || ||||| |||||| Sbjct 896199 TCTACACGTCTCATGAACATGTCGGGGATCCAGAGAGCGTAGAAGAGGTCGCGAGCGCGC 896140 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || || ||||| ||| |||||| | || | || || || || ||||| ||||| Sbjct 896139 ACTTCTTCTTTACCGTGGTTCTTACGGAGGTCGAGGAATTCGAAAACATCCGCGTGCCAT 896080 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| | ||| | ||||| || || |||| ||| ||||| || ||||||||||| || Sbjct 896079 GGCTCAATGTAGATTGCAAAGGCTCCAGGTCGCTTGTTGCCTCCTTGATCGACGTATCGA 896020 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || ||||||||||| |||| |||||||| |||| |||||| || Sbjct 896019 GCGGTGTTGTTGTAGACTCGCAGCATCGGGACGATACCGTTTGA 895976 >seq29 Length=171343 Score = 113 bits (124), Expect = 4e-20 Identities = 349/530 (66%), Gaps = 25/530 (5%) Strand=Plus/Minus Query 57588 AAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGAT 57647 || ||||| || || || ||||||| || || | ||||| || ||||| ||| ||| Sbjct 54625 AAAGCAGAGGCGTCCTTCTGGACCGCAGAGGAGATTGACCTCTCAAAGGACCTGCACGAC 54566 Query 57648 TGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTC 57704 ||||| | ||||| | || | | || || ||||| | || || ||| Sbjct 54565 TGGGAGAACAAGCTCAACAAGGACGAACGCTACTTCATCTCTCACGTACTCGCATTCTTC 54506 Query 57705 GCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAG--AAGTGC 57762 ||| | |||| ||||| || |||||||| | | ||| |||| || || |||| | Sbjct 54505 GCCTCTGCCGACGGTATCGTCAACGAGAACCTCCTAGAACGATT--CAGCAGCGAAGTCC 54448 Query 57763 AAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAG 57822 |||| | ||||| || ||||| ||||| || || | ||||||||| | || ||| Sbjct 54447 AAGTCGCAGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCACGCAG 54388 Query 57823 AAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG-AC-GAGAA-ACGTAGAC 57879 || | || || || ||||||||||| ||| | || | || || | ||| |||| | Sbjct 54387 AAGTCTACTCCCTCCTCATCGATACCTACATCCGCGAAACCGCACAGCGAACACGT---C 54331 Query 57880 TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCA 57936 | ||||| || ||||| || ||||| || || |||| ||||| || ||| |||| | Sbjct 54330 TATTCAATGCCATCGAGACGATGCCTGCCAT---CAAGCGCAAGGCTGAATGGGCAATGA 54274 Query 57937 AATGGATAAAAAGCGCCACGGCCACG---TTCGCCGAGAGGCTAATCGCGTTCGCCGCCG 57993 ||||| | | || | || || | ||||| | | || |||||||| | Sbjct 54273 CTTGGATCTCA---GACAAGCAGTCGTGCTTTGGTGAGAGATTGGTAGCATTCGCCGCTG 54217 Query 57994 TCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCC 58053 | || || || ||||| || || || || || || || ||| | ||||| || || | Sbjct 54216 TAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGAC 54157 Query 58054 TGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 | ||||| || || || || ||| ||| | || | || || |||||| Sbjct 54156 TCATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTGCCGTGATGAGGGT 54107 >seq35 Length=121122 Score = 102 bits (112), Expect = 7e-17 Identities = 352/539 (65%), Gaps = 34/539 (6%) Strand=Plus/Minus Query 57583 ACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGA 57642 ||| |||| |||| || || || ||||||| || || | ||||| || |||||||| Sbjct 14293 ACAGAAAG-CAGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCC 14235 Query 57643 GCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAAC----ACGTGTTG 57695 ||| ||||| | ||||| | || ||| ||| || | | |||| | Sbjct 14234 ACGACTGGGAGAACAAGCTCAACAAG---GAC-GAACGTTTCTTCATCTCTCACGTACTC 14179 Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 || || ||||| | |||||||||| || |||||||| | | || |||| || | Sbjct 14178 GCATTCTTCGCTTCCGCCGATGGTATCGTCAACGAGAACCTCCTAGAGCGATT--CAGCA 14121 Query 57756 G--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACG 57813 | |||| || || | ||||| || ||||| ||||| || || | ||||||||| Sbjct 14120 GCGAAGTCCAGGTCGCCGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACA 14061 Query 57814 TGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGA---GA 57870 | || ||||| | || || || ||||||||||| ||| | || | | | | || Sbjct 14060 TCCACGCAGAAGTCTACTCCCTCCTCATCGATACATACATCCGCGAAACTGCCCAGAGGA 14001 Query 57871 AACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGT 57927 |||| || ||||| || ||||| || ||||| || || |||| ||||| || | Sbjct 14000 CACGT---CTTTTCAATGCCATCGAGACGATGCCAGCCAT---CAAGCGCAAGGCTGAAT 13947 Query 57928 GGTCAATCAAATGGATAAAAAGCGCCACGGCCACG---TTCGCCGAGAGGCTAATCGCGT 57984 || |||| | |||||| | | || | || || | || | | | |||| Sbjct 13946 GGGCAATGACATGGATCTCA---GACAAGCAGTCGTGCTTTGGTGAACGATTGGTAGCGT 13890 Query 57985 TCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGA 58044 ||||||| || || || || ||||| || || || || || || || ||| | |||| Sbjct 13889 TCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGA 13830 Query 58045 AACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 | || || || ||||| || || || || ||||||| | || | || || |||||| Sbjct 13829 AGCGTGGACTCATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGTGATGAGGGT 13771 >seq23 Length=274361 Score = 102 bits (112), Expect = 7e-17 Identities = 352/539 (65%), Gaps = 34/539 (6%) Strand=Plus/Minus Query 57583 ACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGA 57642 ||| |||| |||| || || || ||||||| || || | ||||| || |||||||| Sbjct 224124 ACAGAAAG-CAGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCC 224066 Query 57643 GCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAAC----ACGTGTTG 57695 ||| ||||| | ||||| | || ||| ||| || | | |||| | Sbjct 224065 ACGACTGGGAGAACAAGCTCAACAAG---GAC-GAACGTTTCTTCATCTCTCACGTACTC 224010 Query 57696 GCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA 57755 || || ||||| | |||||||||| || |||||||| | | || |||| || | Sbjct 224009 GCATTCTTCGCTTCCGCCGATGGTATCGTCAACGAGAACCTCCTAGAGCGATT--CAGCA 223952 Query 57756 G--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACG 57813 | |||| || || | ||||| || ||||| ||||| || || | ||||||||| Sbjct 223951 GCGAAGTCCAGGTCGCCGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACA 223892 Query 57814 TGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGA---GA 57870 | || ||||| | || || || ||||||||||| ||| | || | | | | || Sbjct 223891 TCCACGCAGAAGTCTACTCCCTCCTCATCGATACATACATCCGCGAAACTGCCCAGAGGA 223832 Query 57871 AACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGT 57927 |||| || ||||| || ||||| || ||||| || || |||| ||||| || | Sbjct 223831 CACGT---CTTTTCAATGCCATCGAGACGATGCCAGCCAT---CAAGCGCAAGGCTGAAT 223778 Query 57928 GGTCAATCAAATGGATAAAAAGCGCCACGGCCACG---TTCGCCGAGAGGCTAATCGCGT 57984 || |||| | |||||| | | || | || || | || | | | |||| Sbjct 223777 GGGCAATGACATGGATCTCA---GACAAGCAGTCGTGCTTTGGTGAACGATTGGTAGCGT 223721 Query 57985 TCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGA 58044 ||||||| || || || || ||||| || || || || || || || ||| | |||| Sbjct 223720 TCGCCGCTGTAGAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGA 223661 Query 58045 AACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 | || || || ||||| || || || || ||||||| | || | || || |||||| Sbjct 223660 AGCGTGGACTCATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGTGATGAGGGT 223602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765541899680