Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq35 111 2e-19 seq23 111 2e-19 >seq35 Length=121122 Score = 111 bits (122), Expect = 2e-19 Identities = 329/505 (65%), Gaps = 7/505 (1%) Strand=Plus/Plus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 |||||||| | | || || ||||| || ||||| | || ||||| | ||| || || Sbjct 13772 CCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTC 13831 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || | ||| || || || ||||| || || || ||||| || ||||| || || || ||| Sbjct 13832 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAC 13891 Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCA 13860 |||| | |||||| ||||| | | | |||| ||| |||||| | | ||||||||| Sbjct 13892 GCTACCAATCGTTCACCAAAGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCATTCA 13951 Query 13861 GAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTA 13920 | || || || ||| || ||||| |||||||| | | || | ||| | Sbjct 13952 GCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGCATTGAAAAGACGTGTCCTCTGGGCA 14011 Query 13921 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATA 13980 || ||||||||||| || || | | || | ||| | ||| |||||||| || Sbjct 14012 GTTTCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCAATC 14071 Query 13981 GCTATCTGAAAACCATAAAAACATCTAGCTTC--TGACCATTGTACCTCCGAGTAAAATC 14038 ||||| || || || || || || || || |||| || || || | |||| Sbjct 14072 ATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACC--TGGACTTCGCTGCTGAATC 14129 Query 14039 TTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14098 ||| | ||| || || || |||||||| | || || ||||| | || || Sbjct 14130 GCTCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTACGTGAG 14189 Query 14099 TAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT---CCAATCGGCTAAATCCTTAGAAA 14155 || ||| | | || || |||||||| || || ||| ||| | |||||| || | Sbjct 14190 AGATGAAGAAACGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGGAGATCCTTTGAGA 14249 Query 14156 GATCTACTTCATCAACTGTCCAAAA 14180 | || | || || | ||||| || Sbjct 14250 GGTCGATCTCCTCTGCGGTCCAGAA 14274 >seq23 Length=274361 Score = 111 bits (122), Expect = 2e-19 Identities = 329/505 (65%), Gaps = 7/505 (1%) Strand=Plus/Plus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 |||||||| | | || || ||||| || ||||| | || ||||| | ||| || || Sbjct 223603 CCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTTC 223662 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 || | ||| || || || ||||| || || || ||||| || ||||| || || || ||| Sbjct 223663 TTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAAC 223722 Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCA 13860 |||| | |||||| ||||| | | | |||| ||| |||||| | | ||||||||| Sbjct 223723 GCTACCAATCGTTCACCAAAGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCATTCA 223782 Query 13861 GAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTA 13920 | || || || ||| || ||||| |||||||| | | || | ||| | Sbjct 223783 GCCTTGCGCTTGATGGCTGGCATCGTCTCGATGGCATTGAAAAGACGTGTCCTCTGGGCA 223842 Query 13921 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATA 13980 || ||||||||||| || || | | || | ||| | ||| |||||||| || Sbjct 223843 GTTTCGCGGATGTATGTATCGATGAGGAGGGAGTAGACTTCTGCGTGGATGTTTTCAATC 223902 Query 13981 GCTATCTGAAAACCATAAAAACATCTAGCTTC--TGACCATTGTACCTCCGAGTAAAATC 14038 ||||| || || || || || || || || |||| || || || | |||| Sbjct 223903 ATGATCTGGAAGCCGTAGAAGCACCTGGCCTCGGCGACC--TGGACTTCGCTGCTGAATC 223960 Query 14039 TTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14098 ||| | ||| || || || |||||||| | || || ||||| | || || Sbjct 223961 GCTCTAGGAGGTTCTCGTTGACGATACCATCGGCGGAAGCGAAGAATGCGAGTACGTGAG 224020 Query 14099 TAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT---CCAATCGGCTAAATCCTTAGAAA 14155 || ||| | | || || |||||||| || || ||| ||| | |||||| || | Sbjct 224021 AGATGAAGAAACGTTCGTCCTTGTTGAGCTTGTTCTCCCAGTCGTGGAGATCCTTTGAGA 224080 Query 14156 GATCTACTTCATCAACTGTCCAAAA 14180 | || | || || | ||||| || Sbjct 224081 GGTCGATCTCCTCTGCGGTCCAGAA 224105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587878716560