Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 5e-13 seq12 84.2 2e-11 >seq1 Length=6229779 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| | || | |||||||| | || ||||| || | ||||||||| Sbjct 4307432 CCTCCTCTGAGTCTGAGTACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCCGAA 4307373 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || | ||| |||||||||||||| ||||||| || | || ||||| || ||| Sbjct 4307372 AGGGTTCTTCCATCTTCCAGCTGTTTTCCCGCAAAGATCAACCGCTGTTGATCAGGTGGA 4307313 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| || || | || || |||||| || ||| ||||| | ||||| Sbjct 4307312 ATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCATCGATCGTGTCTGAAGACTCGACT 4307253 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || || ||||| | ||| || || ||||| ||||| Sbjct 4307252 TCTAATGTAATTGTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 4307206 >seq12 Length=1303331 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| | || | ||||||||||| || ||||| || | || || || | Sbjct 512519 CCTCCTCTGAGTCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTC--TG 512462 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || ||| | ||| ||||||||||| || ||||||| | ||| || ||||| || | Sbjct 512461 AAAGGGTTCGTCCATCTTCCAGCTGTTTACCCGCAAAGATGAGTCTCTGTTGATCAGGTG 512402 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | |||||||| || || | || || |||||| || | | || || | |||| Sbjct 512401 GGATACCTTCCTTATCTTGGATCTTGCTCTTGACAGCATCAATCGTATCGGACGACTCGA 512342 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || ||||| ||||| || | || || |||||||| ||||| Sbjct 512341 CTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAGATTTGCAT 512293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290337039440