Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq29 93.3 9e-14 seq35 84.2 5e-11 seq23 84.2 5e-11 >seq29 Length=171343 Score = 93.3 bits (102), Expect = 9e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 243512 AAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCA 243571 |||| || || | ||||||||| ||| | | ||| || | || ||| || || |||| Sbjct 53947 AAGCCGTCGAGATCGAAAAGGAGTTCCTCTCCGATGCCCTCCCCGTCCGCCTCATCGGCA 53888 Query 243572 TGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGC 243631 ||||| | || | ||| | ||||||||||| || ||||| ||| | | | | || | Sbjct 53887 TGAACGCAGAGCAGATGTGCCAGTACATCGAGTTTGTAGCAGACAGACTACTAGTAGCAC 53828 Query 243632 TTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGC 243691 | ||| ||||||| |||||||| |||||| || | ||| |||||| | ||||||| Sbjct 53827 TGGGTAATGAGAAGCACTACAACTCGGCGAACCCATTCGACTTCATGGAGATGATTTCGC 53768 Query 243692 T 243692 | Sbjct 53767 T 53767 >seq35 Length=121122 Score = 84.2 bits (92), Expect = 5e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 243512 AAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCA 243571 |||| || || | ||| ||||| ||| | | |||||| |||| ||| || ||||||| Sbjct 13610 AAGCCGTCGAGATCGAGAAGGAGTTCCTGTCCGACGCCCTTCCCGTCCGCCTCATTGGCA 13551 Query 243572 TGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGC 243631 ||||| | || | ||| | || |||||||| |||||||| || | | | | || | Sbjct 13550 TGAACGCAGAGCAGATGTGCCAATACATCGAGTTCGTAGCAGATAGACTACTAGTAGCAC 13491 Query 243632 TTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGC 243691 | ||| | ||||| ||| || | ||||| || | |||||||||| | ||||||| Sbjct 13490 TGGGTAACGAGAAGCACTACGGTTCTACAAACCCATTCGACTTTATGGAGATGATTTCGC 13431 Query 243692 T 243692 | Sbjct 13430 T 13430 >seq23 Length=274361 Score = 84.2 bits (92), Expect = 5e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 243512 AAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCA 243571 |||| || || | ||| ||||| ||| | | |||||| |||| ||| || ||||||| Sbjct 223441 AAGCCGTCGAGATCGAGAAGGAGTTCCTGTCCGACGCCCTTCCCGTCCGCCTCATTGGCA 223382 Query 243572 TGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGC 243631 ||||| | || | ||| | || |||||||| |||||||| || | | | | || | Sbjct 223381 TGAACGCAGAGCAGATGTGCCAATACATCGAGTTCGTAGCAGATAGACTACTAGTAGCAC 223322 Query 243632 TTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGC 243691 | ||| | ||||| ||| || | ||||| || | |||||||||| | ||||||| Sbjct 223321 TGGGTAACGAGAAGCACTACGGTTCTACAAACCCATTCGACTTTATGGAGATGATTTCGC 223262 Query 243692 T 243692 | Sbjct 223261 T 223261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877823879900