Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq11 134 2e-26 seq29 107 2e-18 seq1 105 8e-18 seq35 104 3e-17 seq23 104 3e-17 >seq11 Length=1302298 Score = 134 bits (148), Expect = 2e-26 Identities = 231/333 (69%), Gaps = 2/333 (1%) Strand=Plus/Minus Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 ||||||||||| |||||| | || | || ||||| || || | || ||||||||| | | Sbjct 896400 GCATCCTTGTACAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCCTCGAGAATAGCATAC 896341 Query 114650 CAGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 |||| | | | | || | ||||| || || || || |||| ||||||||| | | Sbjct 896340 CAGAGTTTCTGGGCCTTG-ACAGTCTTCTTTGCGCGTCCTTCCTTCTCGTACTTCAAGAA 896282 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 || | || ||||| || || | || || |||||| | | |||||||||| Sbjct 896281 CAGCTCATCGAACTCCTCTCCGTAAACTTCGTGTAGGTTTGGTGCTTCAGCTGGGCAGAA 896222 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||| | ||| | |||| ||||| ||||| ||||||| | ||| |||||||||||||| Sbjct 896221 GAGGGGCCAATCACCATTTTCCTCTACACGTCTCATGAACATGTCGGGGATCCAGAGAGC 896162 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 ||||||| || ||| ||| ||||||| | || || || ||| | || | || Sbjct 896161 GTAGAAGAGGTCGCGAGCGCGCACTTCTTCTTTACCGTGGTTCTTACGGAGGTCGAGGAA 896102 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTA 114921 || | | |||||||||||| || || | ||| Sbjct 896101 TTCGAAAACATCCGCGTGCCATGGCTCAATGTA 896069 >seq29 Length=171343 Score = 107 bits (118), Expect = 2e-18 Identities = 139/189 (74%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 126064 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTT 126123 |||||| |||||| ||||||| ||||| |||||| || || |||||||| || ||||| Sbjct 54107 ACCCTCATCACGGCAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATGAGTCCACGCTT 54166 Query 126124 CTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAA 126183 ||| | |||||| || || || ||||| ||||||||||| ||||| ||| ||||| Sbjct 54167 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 54226 Query 126184 CGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGTGTCA-AACCACTTCATCGCCCA 126240 || | | | |||| ||| ||| ||||| |||| | | | ||| |||| ||||| Sbjct 54227 TGCTACCAATCTCTCACCAA---AGCACGACTGCTTGTCTGAGATCCAAGTCATTGCCCA 54283 Query 126241 CTGCGCCTT 126249 | ||||| Sbjct 54284 TTCAGCCTT 54292 >seq1 Length=6229779 Score = 105 bits (116), Expect = 8e-18 Identities = 227/334 (68%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 ||||||||||| |||||| | || | || ||||| || || | || |||||||| | | Sbjct 991764 GCATCCTTGTACAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATAGCATAC 991705 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || | | || | | || | ||||| || || || || |||| ||||||||| | | Sbjct 991704 CATAGCTTCTGAGCCTTG-ACAGTCTTCTTTGCCCGTCCTTCCTTCTCGTACTTCAAGAA 991646 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTC-TGAGAGCCCTGGTGCCTTATCTGGGCAGA 114767 ||| | || || || || || | || ||| || |||||| | | | ||||||| Sbjct 991645 GAGCTCATCGAATTCCTCTCCGTACACTTCATGA-AGGTTTGGTGCTTCAGCGGGGCAGA 991587 Query 114768 AGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAG 114827 | | || ||| | ||| |||||| || || ||||||| | || || |||||||||| Sbjct 991586 ACAAAGGCCAATCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGAATCCAGAGAG 991527 Query 114828 CTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 114887 | |||| ||||| || || ||||||| | || || || ||||| || | | Sbjct 991526 CGTAGAAAAGATCGCGTGCTCGGACTTCTTCTTTACCGTGGTTCTTGCGCAAGTCGAGGA 991467 Query 114888 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 114921 | || | || |||||| ||||| || || | ||| Sbjct 991466 ACTCGAAGACATCCGCATGCCATGGCTCAATGTA 991433 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 || || | ||| ||||||||||| || |||||||| || | |||||| |||| | ||| Sbjct 992815 GCTTTCGTTCGAAGGTAGTACATTCCAGTCTTGAGACCTTTCTTCCATCCATAGAAGTGC 992756 Query 113648 ATCGAGGACAACTTG-GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 113706 || || | || ||| | || || || || || | || ||| | | ||| ||||| Sbjct 992755 ATAGAAGT-AAGTTGAGCGAAAGTGGGTGATTGCAAGTGGATGTTGAGAGATTGTGATTG 992697 Query 113707 ATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 113766 |||||||||| ||| | ||||| | ||| ||||| | | |||| |||| ||||| Sbjct 992696 ATCGATGAAGGCTCCTCTGTCCGCTGACATGTCAATGATACTCTTCTGACTGATCTCCCA 992637 Query 113767 CACAGTTCTGTAGAGGTTCTTAATATCATCTGG 113799 || |||| || | ||||| |||||||| Sbjct 992636 TACTGTTCGATAAATAGCTTTAATCTCATCTGG 992604 >seq35 Length=121122 Score = 104 bits (114), Expect = 3e-17 Identities = 138/189 (73%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 126064 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTT 126123 |||||| |||||| ||||||| || || ||||| || || |||||||| || ||||| Sbjct 13771 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 13830 Query 126124 CTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAA 126183 ||| | |||||| || || || ||||| ||||||||||| ||||| ||| ||||| Sbjct 13831 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 13890 Query 126184 CGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGTGTCA-AACCACTTCATCGCCCA 126240 ||| | | || ||| ||| ||| ||||| |||| | | | ||| |||| ||||| Sbjct 13891 CGCTACCAATCGTTCACCAA---AGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCA 13947 Query 126241 CTGCGCCTT 126249 | ||||| Sbjct 13948 TTCAGCCTT 13956 >seq23 Length=274361 Score = 104 bits (114), Expect = 3e-17 Identities = 138/189 (73%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 126064 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTT 126123 |||||| |||||| ||||||| || || ||||| || || |||||||| || ||||| Sbjct 223602 ACCCTCATCACGGCAGATGAGCTCGTTGGAGAATGTAAGACCAGGCATGAGTCCACGCTT 223661 Query 126124 CTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAA 126183 ||| | |||||| || || || ||||| ||||||||||| ||||| ||| ||||| Sbjct 223662 CTTGAGCCAGAAGATGGCGGCGAAAGAACCAGAGAAGAAGATGCCCTCTACAGCGGCGAA 223721 Query 126184 CGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGTGTCA-AACCACTTCATCGCCCA 126240 ||| | | || ||| ||| ||| ||||| |||| | | | ||| |||| ||||| Sbjct 223722 CGCTACCAATCGTTCACCAA---AGCACGACTGCTTGTCTGAGATCCATGTCATTGCCCA 223778 Query 126241 CTGCGCCTT 126249 | ||||| Sbjct 223779 TTCAGCCTT 223787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352450094320