Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq11 114 1e-20 seq1 89.7 5e-13 >seq11 Length=1302298 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 94095 CTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCA 94154 ||| ||||| ||||||| ||||| || |||| ||||||| | || || ||||| || || Sbjct 895975 CTCAAACGGTATCGTCCCGATGCTGCGAGTCTACAACAACACCGCTCGATACGTCGATCA 896034 Query 94155 GGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGT 94214 || || | | | || | || || |||| | ||||| ||||||||||| || Sbjct 896035 AGGAGGCAACAAGCGACCTGGAGCCTTTGCAATCTACATTGAGCCATGGCACGCGGATGT 896094 Query 94215 GCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCT 94274 | ||| ||||||| || ||||||||||| || || | | | || | ||||| Sbjct 896095 TTTCGAATTCCTCGACCTCCGTAAGAACCACGGTAAAGAAGAAGTGCGCGCTCGCGACCT 896154 Query 94275 CTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325 |||||||||||||||| | || ||| | || |||| ||| || ||| |||| Sbjct 896155 CTTCTACGCTCTCTGGATCCCCGACATGTTCATGAGACGTGTAGAGGAAAA 896205 >seq1 Length=6229779 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 94095 CTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCA 94154 ||| ||||| | || ||||||||||| |||| ||||||| | || || ||||| || || Sbjct 991339 CTCGAACGGTATTGTACCTATGCTCCGAGTCTACAACAACACCGCTCGATACGTCGATCA 991398 Query 94155 GGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGT 94214 || || | | | || | || || |||| | ||||| ||||| ||||| || Sbjct 991399 AGGAGGCAACAAGCGACCTGGAGCCTTTGCCATCTACATTGAGCCATGGCATGCGGATGT 991458 Query 94215 GCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCT 94274 | ||| ||||| |||| ||||||||||| || || | | || | || || Sbjct 991459 CTTCGAGTTCCTCGACTTGCGCAAGAACCACGGTAAAGAAGAAGTCCGAGCACGCGATCT 991518 Query 94275 CTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAAC 94326 ||||||||||||||| | || || | || |||| ||| || ||| | ||| Sbjct 991519 TTTCTACGCTCTCTGGATTCCCGATATGTTCATGAGACGAGTAGAGGAGAAC 991570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722247657840